Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo264g00001 ATGGAAGGTCGCCGGAGGATAACGCTTTACGATCAAATGACAGCTGGCAACAGTAGCAGCAGCGGCGGCGGCCGAGAGTCATTAGCCAGCCTCATGCTCGACGACGTCGTTTTCAAGAGAACCGAAGCCGAAGCCGAAGCGAGCCGCAGGCTGAGCCGAAGCCGGACTCTCCAAGATATCATCAGCGAAGAAAAACCTAATAATAACAGCAACAACGCGAAGGATCGGAACTCTTGGAAAGCCTTCAAGGAGAAGCTTCGGCTCAAGCGCGCCATCGGCTCGGCTTGGTCCTCCAATATCACTAATCACAGCAATGATGATGATAGGAATAATTTACCTGAAACTCGCCATGACTCGGACGAGTTAACTCAGCAGAACGACGTCGTTGCGGAAGACGTCAACGATTCGGATCCGATCGGGTCTCCGGTGGACAACGCGGCGGCCGGCGGCGACTCCTCCGACGGAGAGAACAACCACGAGGCGGTGGTCGGCGTGTCGCTGATGGATTTGTTGGAGGAGGCGGAGCAGGAAATGGATTTGTATAGAGTGATTGATAATGAAGATGACGGTTATGGTAATGATGACGTGGAGGAATATAAGAAGAGAGAAGAAGAAGAAAAAGAGGGGGGTGTGGAAGAAGAAATAGGGGGTGCGGTGGAGTACAACTGCTGCGTGTGCATGGTGCGGCACAAAGGCGCGGCGTTTATCCCGTGCGGACACACGTTCTGCAGAATGTGCTCCAGGGAGATTTGGGTGAGCAGAGGGAACTGCCCTCTCTGCAATAATTTAATTTTGGAAATTCTTGATATTTTCTGA 816 0.5233 MEGRRRITLYDQMTAGNSSSSGGGRESLASLMLDDVVFKRTEAEAEASRRLSRSRTLQDIISEEKPNNNSNNAKDRNSWKAFKEKLRLKRAIGSAWSSNITNHSNDDDRNNLPETRHDSDELTQQNDVVAEDVNDSDPIGSPVDNAAAGGDSSDGENNHEAVVGVSLMDLLEEAEQEMDLYRVIDNEDDGYGNDDVEEYKKREEEEKEGGVEEEIGGAVEYNCCVCMVRHKGAAFIPCGHTFCRMCSREIWVSRGNCPLCNNLILEILDIF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo264g00001 271 SMART ring_2 223 260 IPR001841 -
Pumo264g00001 271 ProSiteProfiles Zinc finger RING-type profile. 223 261 IPR001841 -
Pumo264g00001 271 MobiDBLite consensus disorder prediction 11 26 - -
Pumo264g00001 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 192 271 IPR013083 -
Pumo264g00001 271 MobiDBLite consensus disorder prediction 107 124 - -
Pumo264g00001 271 MobiDBLite consensus disorder prediction 44 78 - -
Pumo264g00001 271 MobiDBLite consensus disorder prediction 61 76 - -
Pumo264g00001 271 MobiDBLite consensus disorder prediction 1 26 - -
Pumo264g00001 271 MobiDBLite consensus disorder prediction 98 158 - -
Pumo264g00001 271 SUPERFAMILY RING/U-box 222 267 - -
Pumo264g00001 271 MobiDBLite consensus disorder prediction 44 60 - -
Pumo264g00001 271 Pfam Zinc finger, C3HC4 type (RING finger) 221 264 - -
Pumo264g00001 271 PANTHER OS01G0917900 PROTEIN 4 271 - -
Pumo264g00001 271 CDD RING-HC 223 260 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo264g00001 4 271 C3H Transcription Factor Family AT3G25030 35.740 3.80e-43 145