Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo261g00012 ATGCCAAACAAAAGTTTGGATGTGTTTATCTTCGATCCATCAAATAGTAAACTGCTAGATTGGAGGAAGCGTTGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCACAGAGACTCCAGATTAAGAATTATACACAGAGATTTGAAGGCAAGTAATATCTTGTTAGATGAAGAGCTAAATCCAAAAATATCAGACTTTGGTTTGGCTAGAATCTTTGGAGGGAGTGAAAATCAGGCCAATACTAACAGGGTAGTTGGAACCTATGGCTATATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGGTACTAGAGATTGTTTGTGGAAGAAGAAACTCAAGCTTTTATGACAATGAGAATGCTCTTAGCCTTTTAGGATTTGCCTGGATACAATGGAAGGAAGGCAATATATTATCTTTAATAGATCCAGCAATATATGATGTTAGTCATCATAAAGATATTTTTAGGTGCATACACATAGGACTTCTATGTGTACAAGAACTTGCTGTAGACAGACCCACAATGGCTGCAGTAATTTCTATGCATAACAGTGAGGTTTCGTTTCTTCCTCCTCCAAGTCAACCTGCATTCATCCAGAGGCAAGATATGTTGAATTCAGTTTCATCTAAAGAAAGTAATAGATTTTACTCCATCAATGCTGTTAGTATTACAGATATCCGAGGTAGATAG 732 0.3689 MPNKSLDVFIFDPSNSKLLDWRKRCSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGLARIFGGSENQANTNRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVCGRRNSSFYDNENALSLLGFAWIQWKEGNILSLIDPAIYDVSHHKDIFRCIHIGLLCVQELAVDRPTMAAVISMHNSEVSFLPPPSQPAFIQRQDMLNSVSSKESNRFYSINAVSITDIRGR 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo261g00012 243 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 204 - -
Pumo261g00012 243 ProSiteProfiles Protein kinase domain profile. 1 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo261g00012 243 SMART serkin_6 3 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo261g00012 243 Pfam Protein kinase domain 19 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo261g00012 243 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Pumo261g00012 243 Gene3D Transferase(Phosphotransferase) domain 1 1 202 - -
Pumo261g00012 243 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 220 - -
Pumo261g00012 243 SUPERFAMILY Protein kinase-like (PK-like) 1 230 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo261g00012 3 239 Receptor kinase-like Gene Family AT4G23150 56.723 6.99e-88 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo261g00012 Pkinase 2.7e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo261g00012 - - gmx:113002415 422.935