Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo261g00010 ATGTGTTTCGGCAACCGTGCAAACTTGTTCTTTGTTCTGTTTATACTGTGTCGTTATGTGTTTGACGTTGGTATTGCCATAGACACCATCACATCATCTCAATCCATCAAGGACCCTGAAACACTAACATCCAAAGATGGTAACTTCACTTTGGGGTTCTTCACCCCTCAAAATTCTACAAACCGCTATGTTGGAATCTGGTGGAAGTCTCAGTCCACAGTCATATGGGTTGCTAACAGAAACCAGCCACTGAATGATTCTTCTGGAATTGTTACAATTTCTGAAGATGGTAATCTTGTGTTGTTGAATGGACAGAAACAAGTGATTTGGTCAACTAATGTGTCCAACGCGTCATCCAATACAAGTTCACAGTTTTCGGACTCTGGTAAGCTTGTACTCACAGAAACCGCAACGGGAAACATCTTATGGGATAGTTTTCAGCTACCTTCAAATACATTATTGCCTGGGATGAAGCTCTCAAGCAACAAAACAGGTATGAGAGTAAAACTTACATCATGGAAAAGCCCCTCTAATCCCTCTGTTGGCAGCTTCTCTACCGGTGTTGTTCAACGCATAAACATACTTGAAGTGTTCATTTGGAATGGAACTCAACCATACTGGCGCAGTGGTCCATGGAACGGTGGGGTATTTACGGGGATACCGACCATGTCAACATATCTTAATGGTTACAAAGGTGGGGATGATGGGGAAGGAAATACAGAAATCTATTACACAGTGCCAAGTGCATCACTATTTGTAGTCTATATGTTAAATTCGCAAGGCTGGTTAGATCAAACATGGTGGGATGATGAGAACAAAGAAATGCTAGTTCAATGGACTAGTCGAGAATCAGATTGTGATGTTTATGGTATTTGTGGACCATTCACAAGCTGTGATGCACAGAGCTCACCCATATGTAGCTGTTTGAAAGGATTTGAGCCAAGGAACAAAGAGGAGTGGGATAGACAAAACTGGAATAGTGGATGTGTTAGGAGGACACGTTTGCAGTGTGAAAGGGTCAGAGATCAAAACACAAGTACAGATACGAAGGAAGATGGATTTTTGAAACTGCAGAAGGTTAAAGTTCCAGATTTTCCAGAAGGGTCTCCTGTTGATCCAGACATGTGCAGAAGCCAATGCTTGGAGAATTGCTCTTGTGTTGCATATTCTCATAATGATGAGATTGGTTGCATGTCTTGGACTGGGAATCTATTTGACATACAACAATTCTCAGATGGAGGACTTGATCTATATGTTCGTGTAGCCCACACTGAACTTGATAAAGGGACAAACACAAAAATCATCATTATAATAACAGTGATAATAGGAACTGTCATCATTGTTACTTGTGCATATGTCATGTGGAGGACTTCCAATCATCCAGGTAAAATATGGCACTTAATTAAATCAAGAAGGAAAGGGAACAGCCATGCTTTTGTACAATTTAACAATGGTGAAACACCAGAACATCCAAACCACAAAGTAATTGAAGAACTGTCACAAGTTACACTACCGGAGATGTTACTATTTGATTTTGAAAGGGTTGCAACAGCCACAAACAACTTCCACTTGTCCAACAAACTTGGGCAGGGTGGTTTTGGTCCGGTGTACAAGGGGAAACTGCAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAAGGTCTAGAAGAATTCATGAATGAAGTAGTGGTGATTTCCAAGCTTCAACACCGTAATCTTGTAAGGCTTTTTGGCTGCTGTGTTGAAGGTGATGAAAAGATGTTGATATATGAATACATGCCAAACAAAAGTTTGGATGTGTTTATCTATGATCCATCAAGAAGTAAACTCCTTGATTGGAGGAAGCGCAGTAGCATAATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCACAGAGACTCCAGACTAAGAATTATACACAGAGATTTGAAGGCAAGTAATATATTGTTAGATGAAGAGCTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGGACTGAAGATCAGGCCAATACAACTAGGGTTGTTGGAACCTATGGCTATATGTCCCCTGAATATGCAATGCAAGGACTATTCTCAGAGAAATCAGATGTCTTTAGCTTTGGTGTTTTGGTACTAGAGATTGTTAGTGGAAGAAGAAACTCAAGCTTTTATGACAGTGTGCATGCTCTTAGCCTTTTAGGATTTGTATGGATACAATGGAGGGAAGGTTATATATTATCTTTAATAGATCCAGAAATATATGATCCTAGTCATCATAAAGATATTTTAAGGTGCATACACATAGGACTTCTATGTGTACAAGAACTTGCTATAGACAGGCCCACTATGTCTGCAGTAATATCAATGCTTAACAGTGATGTTGCATTTCTTCCTCCTCCAAGCCAACCTGCATTCATTCTGCGGCAAAATATGTCGAATCCAGAGTCATCTAATGAAATTAACAGATTTTGCTCCATTAATAATACCACTCATCATCCCTTCCCTCTCTCTTCCTTTTCCAACCCTTCATCTGCAAGGCCTCTAGAGACGCTCCACCACCAAGCGCGATCGAAGGAGTCGGAGATCGAAGAGGAGTGCAAGGCTCACCACCAGGCCTTCATCCTCGTTGTCAACGACCTCCAATCCCTCCTCTCCGACGTCGATTTGCCCAAGTCCTCCCTCTCTGATTCCAACTCGCGGCTCCTGCACATCGCACGCCTGCTCCTCTCGTCGCTCATGCGTCAAGCTGAAGTAGGTCTGCACACGCACGAATTGCCACCTCGCGGACGACAGCATGAGTGTTTGTTTACGTGTCTTGGATCCGCTTTGGCCCTCAAATTCGCGTCAAAAATTGGAAGAAGACGCAAGCCCCGCCACTGCGATCTGTTATTGACAATATATCTACTTTAA 2919 0.4186 MCFGNRANLFFVLFILCRYVFDVGIAIDTITSSQSIKDPETLTSKDGNFTLGFFTPQNSTNRYVGIWWKSQSTVIWVANRNQPLNDSSGIVTISEDGNLVLLNGQKQVIWSTNVSNASSNTSSQFSDSGKLVLTETATGNILWDSFQLPSNTLLPGMKLSSNKTGMRVKLTSWKSPSNPSVGSFSTGVVQRINILEVFIWNGTQPYWRSGPWNGGVFTGIPTMSTYLNGYKGGDDGEGNTEIYYTVPSASLFVVYMLNSQGWLDQTWWDDENKEMLVQWTSRESDCDVYGICGPFTSCDAQSSPICSCLKGFEPRNKEEWDRQNWNSGCVRRTRLQCERVRDQNTSTDTKEDGFLKLQKVKVPDFPEGSPVDPDMCRSQCLENCSCVAYSHNDEIGCMSWTGNLFDIQQFSDGGLDLYVRVAHTELDKGTNTKIIIIITVIIGTVIIVTCAYVMWRTSNHPGKIWHLIKSRRKGNSHAFVQFNNGETPEHPNHKVIEELSQVTLPEMLLFDFERVATATNNFHLSNKLGQGGFGPVYKGKLQDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLFGCCVEGDEKMLIYEYMPNKSLDVFIYDPSRSKLLDWRKRSSIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEELNPKISDFGMARIFGGTEDQANTTRVVGTYGYMSPEYAMQGLFSEKSDVFSFGVLVLEIVSGRRNSSFYDSVHALSLLGFVWIQWREGYILSLIDPEIYDPSHHKDILRCIHIGLLCVQELAIDRPTMSAVISMLNSDVAFLPPPSQPAFILRQNMSNPESSNEINRFCSINNTTHHPFPLSSFSNPSSARPLETLHHQARSKESEIEEECKAHHQAFILVVNDLQSLLSDVDLPKSSLSDSNSRLLHIARLLLSSLMRQAEVGLHTHELPPRGRQHECLFTCLGSALALKFASKIGRRRKPRHCDLLLTIYLL 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo261g00010 972 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Pumo261g00010 972 ProSiteProfiles PAN/Apple domain profile. 337 422 IPR003609 -
Pumo261g00010 972 CDD B_lectin 33 146 IPR001480 -
Pumo261g00010 972 Pfam PAN-like domain 349 407 IPR003609 -
Pumo261g00010 972 Pfam Protein tyrosine and serine/threonine kinase 523 727 IPR001245 GO:0004672|GO:0006468
Pumo261g00010 972 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 179 IPR036426 -
Pumo261g00010 972 Gene3D Phosphorylase Kinase; domain 1 497 597 - -
Pumo261g00010 972 FunFam receptor-like serine/threonine-protein kinase SD1-8 494 597 - -
Pumo261g00010 972 ProSiteProfiles Protein kinase domain profile. 522 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo261g00010 972 Pfam S-locus glycoprotein domain 207 315 IPR000858 GO:0048544
Pumo261g00010 972 Gene3D - 23 147 IPR036426 -
Pumo261g00010 972 SMART serkin_6 522 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo261g00010 972 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 784 - -
Pumo261g00010 972 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
Pumo261g00010 972 SUPERFAMILY Protein kinase-like (PK-like) 507 821 IPR011009 -
Pumo261g00010 972 Gene3D Transferase(Phosphotransferase) domain 1 598 798 - -
Pumo261g00010 972 CDD PAN_AP_plant 342 422 - -
Pumo261g00010 972 SMART blect_4 33 149 IPR001480 -
Pumo261g00010 972 CDD STKc_IRAK 528 794 - -
Pumo261g00010 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Pumo261g00010 972 Pfam D-mannose binding lectin 73 174 IPR001480 -
Pumo261g00010 972 SMART ntp_6 349 421 IPR003609 -
Pumo261g00010 972 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo261g00010 490 833 Receptor kinase-like Gene Family AT3G45860 55.780 3.54e-123 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo261g00010 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo261g00010 - - gmx:100779455 1457.58