Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo257g00010 ATGTCAGATATCAAAACTCTCCGCAACATTGCCATCATTGCGCACGTTGACCACGGTAAAACCACTCTAGTAGACAAACTTTTACAGCAATCAGGTGCACTTGGCGATCGTGCAGGCGAGATTGAGCGTGTCATGGATTCAGGCGCGATTGAAAGTGAACGTGGTATTACCATTCTTGCAAAAAACACTGCAATCAAATGGTTAGATGCACGTACCAATACAGAATACCGTATTAACATCGTCGACACCCCAGGACACGCAGACTTCGGTGGTGAAGTTGAACGTGTAATGTCGATGGTTGACTGTGTACTTCTTCTTGTTGACTCTCAAGAAGGCCCAATGCCACAAACTCGTTTCGTAACGCAAAAAGCGTTCGCACGTGGTTTGAAGCCAATCGTAATTATCAACAAAGTCGACAAGCCAAGCGCGCGTCCAGATTGGGTTATTGATCAAGTATTTGATTTGTTTGATAACCTTGGTGGTTCTGACGAACAGTTAGACTTCCCAGTTGTTTACGCTTCAGGTCTTCGTGGTGTTGCTGGTCCATCTCCAGAAGAACTTGCTGAAGATATGACTCCATTGTTCCAAACCATCGTAGACATTGTTGAGCCACCAGCAGTTGATGTTGATGGTCCATTCCAAATGCAGATTTCTTCACTTGACTATAACAGCTTCGTAGGTGTTATCGGTGTTGGTCGTATTCAACGTGGTTCTGTAAAATTAAACACACCAGTAACTGTGATTGATAAAGACGGTAAGACACGTAACGGTCGTATCTTAAAAATCATGGGTTACCATGGTTTAGAACGTGTTGATGTTGAATCTGCTCAAGCAGGCGATATCGTGTGTATCACAGGTATTGATGAACTTCATATTTCTGACACCATTTGTGATCCGAAAAATGTTGAAGCTTTACCAGCATTGTCTGTAGATGAACCTACAGTAACGATGACTTTCCAAGTAAACAACTCTCCGTTTGCTGGTAAAGAAGGTAAATTTGTTACTTCACGTAATATCCGTGAACGTCTTAGACCGCGAATTAATTCATAA 1050 0.4257 MSDIKTLRNIAIIAHVDHGKTTLVDKLLQQSGALGDRAGEIERVMDSGAIESERGITILAKNTAIKWLDARTNTEYRINIVDTPGHADFGGEVERVMSMVDCVLLLVDSQEGPMPQTRFVTQKAFARGLKPIVIINKVDKPSARPDWVIDQVFDLFDNLGGSDEQLDFPVVYASGLRGVAGPSPEELAEDMTPLFQTIVDIVEPPAVDVDGPFQMQISSLDYNSFVGVIGVGRIQRGSVKLNTPVTVIDKDGKTRNGRILKIMGYHGLERVDVESAQAGDIVCITGIDELHISDTICDPKNVEALPALSVDEPTVTMTFQVNNSPFAGKEGKFVTSRNIRERLRPRINS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo257g00010 349 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 5 206 IPR000795 GO:0003924|GO:0005525
Pumo257g00010 349 Pfam Elongation factor Tu domain 2 227 297 IPR004161 GO:0005525
Pumo257g00010 349 NCBIfam small GTP-binding protein domain 8 147 IPR005225 GO:0005525
Pumo257g00010 349 Gene3D - 3 206 IPR027417 -
Pumo257g00010 349 CDD TypA_BipA 7 205 IPR047041 -
Pumo257g00010 349 SUPERFAMILY Translation proteins 162 307 IPR009000 -
Pumo257g00010 349 Gene3D Elongation Factor G (Translational Gtpase), domain 3 310 349 - -
Pumo257g00010 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 227 IPR027417 -
Pumo257g00010 349 PRINTS GTP-binding elongation factor signature 79 89 IPR000795 GO:0003924|GO:0005525
Pumo257g00010 349 PRINTS GTP-binding elongation factor signature 95 106 IPR000795 GO:0003924|GO:0005525
Pumo257g00010 349 PRINTS GTP-binding elongation factor signature 53 61 IPR000795 GO:0003924|GO:0005525
Pumo257g00010 349 PRINTS GTP-binding elongation factor signature 9 22 IPR000795 GO:0003924|GO:0005525
Pumo257g00010 349 PRINTS GTP-binding elongation factor signature 131 140 IPR000795 GO:0003924|GO:0005525
Pumo257g00010 349 CDD BipA_TypA_II 213 306 IPR047042 -
Pumo257g00010 349 FunFam GTP-binding protein TypA 4 206 - -
Pumo257g00010 349 Gene3D Translation factors 207 307 - -
Pumo257g00010 349 FunFam GTP-binding protein TypA 207 307 - -
Pumo257g00010 349 Pfam Elongation factor Tu GTP binding domain 6 202 IPR000795 GO:0003924|GO:0005525
Pumo257g00010 349 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 208 330 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo257g00010 7 140 Eukaryotic Initiation Factors Gene Family AT1G56070 36.806 9.57e-25 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo257g00010 K06207 - acb:A1S_2835 638.262