Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo255g00002 ATGGCTGAGCAGCAAACGATCAATGCCATTGATTGTTCCTTTAACTCTTTATCTATGGTGTCTGCTAAAAAATATGACGTTTTTCTGAGCTTTCGAGGTGAGGACACCCGCAGGAACTTCACAAGCCATCTTTATGAAGCGTTGAGGCAAAAAAAAGTTGAAACCTATATACATGACCGGCTTCAAAAGGGAGATGAAATCTCACCGGCACTCATGAAAGCCATTGAAGATTCTCATGTATCTATTGTCGTTTTCTCAGAGAATTATGCTTTCTCAAAGTGGTGCTTGAGTGAACTCAGCAAAATTCTGGAATGCAAGAAACGCCAAGGACAGATTGTGATACCTGTATTTTACAACATAGATCCATCCCATGTGAGGAAACAGACAGGGAACTACGAGCAGGCCTTTGCAAAACATGAGGGAGAACTCAGGTGCAACAAATGGAAAGCAGCTCTCACGGAAGTAGCCAATTTAGCTGGGTGGGATTCTCAAACTTATAGGACTGAATCTGAACTCCTTAAGGACATTGTTGGAGATCTTTTGCGAAAATTGACTCCTAGATACCCCAACCAACTTAAAGGACTGATTGGTATTGAAGAAAATTACTTACAGATTGAATCAATACTGAAATTTGGGTCAAGTGAAGTTAGAATCCTTGGAATATGGGGAATGGGTGGCATAGGTAAGACGACCCTTGCTACTGCTTTATATGACAGAATGTCTCATGACTTCAAAGGTCGTTGCTTCCTTGCAAACATAAGGGAAGAAGCAGACAAGCATGGACTCAAAGTTTTATGTAATAAACTTTTTTCTGAGGTATTAGAGAATGAAAATAACTGTTTTGATGTATCTCATTTTGTCTTGAGTAGGTTTAGGTGTAAAAAGGTTTTCATTGTGTTGGATGATGTGGCTACCTCAGGGCAATTAGAAAATCTAATTGCAGATTATGATTTCTTGGGACCAGGAAGTAGAGTCATGGTTACAACTAGAAATAAGCAAATATTTAGCCAAGTTGATGAAATATATGAGGTCCAGAAATTGAGCTTTAACCATTCTCTTCAGCTTTTCTGTTTAACTGTTTTTAGAGAAAAAGAACCTAAACATGGATATGAAGATCTATCAACAAGTGCAATTTCCTATTGCGAAGGTATTCCTTTGGCTTTAAAAGCTTTGGGTGCTAGTCTTCGCTCAAGAAGTAAAGAGGCATGGGAAAGTGAATTGAGAAAAGTCCAAAAGATTTCAAATATGGAAATTCATAATGTATTAAAATTAAGTTATGATGGCTTAGATCGTTCTCAAAAGGACATCTTTCTAGACATTGTATGTTTCTTCAAACTATGGCAGAGAGATCGGTTAACAAGTCTACTAGAAGCTTGTGATTTCTTTGCAGCATATGGAATAGAAGTCCTTTTAGATAAAGCTCTCATAACAATTTATTCTGACAATTGGATAGAAATGCATGACTTGATACAAGAAATGGGTCGGGAAATTGTTATCAAGAATCTATCAAAGACCCTGGAAGACGAAGTCGATTGTGGAAACATGAGGAAGTTCATGATGTATTGA 1566 0.3768 MAEQQTINAIDCSFNSLSMVSAKKYDVFLSFRGEDTRRNFTSHLYEALRQKKVETYIHDRLQKGDEISPALMKAIEDSHVSIVVFSENYAFSKWCLSELSKILECKKRQGQIVIPVFYNIDPSHVRKQTGNYEQAFAKHEGELRCNKWKAALTEVANLAGWDSQTYRTESELLKDIVGDLLRKLTPRYPNQLKGLIGIEENYLQIESILKFGSSEVRILGIWGMGGIGKTTLATALYDRMSHDFKGRCFLANIREEADKHGLKVLCNKLFSEVLENENNCFDVSHFVLSRFRCKKVFIVLDDVATSGQLENLIADYDFLGPGSRVMVTTRNKQIFSQVDEIYEVQKLSFNHSLQLFCLTVFREKEPKHGYEDLSTSAISYCEGIPLALKALGASLRSRSKEAWESELRKVQKISNMEIHNVLKLSYDGLDRSQKDIFLDIVCFFKLWQRDRLTSLLEACDFFAAYGIEVLLDKALITIYSDNWIEMHDLIQEMGREIVIKNLSKTLEDEVDCGNMRKFMMY 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo255g00002 521 Gene3D - 21 185 IPR035897 -
Pumo255g00002 521 Gene3D - 186 345 IPR027417 -
Pumo255g00002 521 Gene3D - 346 430 IPR042197 -
Pumo255g00002 521 Pfam NB-ARC domain 211 412 IPR002182 GO:0043531
Pumo255g00002 521 Pfam TIR domain 24 190 IPR000157 GO:0007165
Pumo255g00002 521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 440 IPR027417 -
Pumo255g00002 521 PRINTS Disease resistance protein signature 218 233 - -
Pumo255g00002 521 PRINTS Disease resistance protein signature 381 395 - -
Pumo255g00002 521 PRINTS Disease resistance protein signature 290 304 - -
Pumo255g00002 521 SUPERFAMILY "Winged helix" DNA-binding domain 417 500 IPR036390 -
Pumo255g00002 521 ProSiteProfiles TIR domain profile. 23 184 IPR000157 GO:0007165
Pumo255g00002 521 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 25 499 IPR044974 GO:0006952
Pumo255g00002 521 FunFam Disease resistance protein (TIR-NBS-LRR class) 21 186 - -
Pumo255g00002 521 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 161 IPR035897 -
Pumo255g00002 521 SMART till_3 24 158 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo255g00002 21 498 WRKY Transcription Factor Family AT4G12020 31.288 4.83e-64 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo255g00002 - - gmx:100793798 768.844