Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo249g00007 ATGAAGGAGAGGCAACGTTGGAGAGCTGAAGAGGATGCTTTATTACGTTCTTATGTCAAACAGTATGGTCCTAGGGAATGGAATCTCGTGTCTCAGCGCATGAACACACCTCTTAACAGGGATGCAAAGTCGTGCTTGGAAAGGTGGAAGAACTACCTCAAGCCTGGCATCAAAAAAGGGTCTCTTACCGAAGAAGAGCAGCGCCTTGTCATCCGCCTTCAAGCAAAATACGGTAACAAATGGAAGAAAATTGCTGCAGAAGTCCCAGGTCGCACTGCTAAGCGGTTAGGCAAGTGGTGGGAAGTCTTCAAAGAGAAGCAACAAAGAGAGAAAAAGGAGATCAACAGAATCGCTGACCCGATTAACAATAGTAAGTACGAGCACATACTCGAGAGTTTTGCAGAGAAACTAGTGAAGGAACGCCCTTCACCATCATTTGTTATGGCTGCTTCCGATGGGGCATTTCTGCGAACCGATACACCAGCACCTGCATCAGCCTTGCTTCCTTCATGGCTTTCGAATTCTAGTAGTGCTGCAGCCGTCGGCCCAAGTTCCCTTTCCGTGACACTAAGTCTTTCTTCCTCAACGGTGGCCGCACCTCCATTTTCATGGTTGCAACCCGAGAGAGGACCAGACAATGCTCCTTTTGTTTTGGGGAATGTAGCAGCGCTTCACGGAGCTGTTCCAGCTTTAAGTGATAACATGCTTATATCTCAGATGGTGGAGCACTGTAAAGACTTGGAAGAGGGGCATCGTGCTTTGGCCGCGCACAAGAAGGAGGCAGCGTGGAGGTTAAGTCGGGTAGAGTTGCAGTTGGAGTCAGAGAAGGCGAGCCGAAGAAGGGAGGAGATTGAAGAATTTGAAGCAAAGATTAAAGCTTTTCAGGAAGAGGAAAAAGCTGCTTTGGGTAGAATTGAAGCAGAATACAGAGAACAGTTAGCTGCATTGAAGAGAGATGCTGAAAACAAGGAGCAAAAGTTGGCAGAACAATGGGCTGCAAAGCATTTGCGGCTTACTAGGTTACTAGAGCAATTAGGATGCAGAGCAGGGCTCCCTGACCCAAATGCAAGATGA 1074 0.4777 MKERQRWRAEEDALLRSYVKQYGPREWNLVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQAKYGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREKKEINRIADPINNSKYEHILESFAEKLVKERPSPSFVMAASDGAFLRTDTPAPASALLPSWLSNSSSAAAVGPSSLSVTLSLSSSTVAAPPFSWLQPERGPDNAPFVLGNVAALHGAVPALSDNMLISQMVEHCKDLEEGHRALAAHKKEAAWRLSRVELQLESEKASRRREEIEEFEAKIKAFQEEEKAALGRIEAEYREQLAALKRDAENKEQKLAEQWAAKHLRLTRLLEQLGCRAGLPDPNAR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo249g00007 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Pumo249g00007 357 Coils Coil 265 304 - -
Pumo249g00007 357 Gene3D - 4 58 - -
Pumo249g00007 357 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Pumo249g00007 357 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 350 - -
Pumo249g00007 357 FunFam MYB-related transcription factor 4 58 - -
Pumo249g00007 357 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Pumo249g00007 357 CDD SANT 6 53 IPR001005 -
Pumo249g00007 357 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Pumo249g00007 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Pumo249g00007 357 Coils Coil 306 330 - -
Pumo249g00007 357 SMART sant 58 106 IPR001005 -
Pumo249g00007 357 SMART sant 3 55 IPR001005 -
Pumo249g00007 357 CDD SANT 63 104 IPR001005 -
Pumo249g00007 357 Pfam Myb-like DNA-binding domain 7 68 - -
Pumo249g00007 357 Gene3D - 62 127 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo249g00007 1 352 MYB Transcription Factor Family AT2G37630 62.264 1.44e-149 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pumo249g00007 Myb_DNA-bind_6 1.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo249g00007 K09422 - gmx:100101908 649.047