Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo243g00006 ATGGTGGTAACACAACTAAACTTGAGATCAATATTGTTGCTGAGTTTCATACTCATAGCACTCATTACAAAGGCACAAGCACAGCCTCCCCTGGGAAGTAACTGCCAAAACACCACCCAACAGCCTCTCAGCAATGCATACCAAACCAATCTTGATAGAATCTTCACATGGATGTCCTCTGATGCAGGCACAAGCCAAGGTTATAATCACACCACCATAGGCACCAACAGCTCTGTGTATGGCCTCTATGATTGCGGCGGCGACGTGGTTGGATACTTTTGTCAATTTTGTGTTTCCAATGCTGTTAAAGAAGCCACTCGGCTCTGCCCCAGTAGGGTGTCTGCTGTGGTGTGGAATGATTACTGCATTATAAGGTATTCTAATGAGAGCTTCTTTGGGGAATTTCTGACACACCCAACATGGCATACTCTTGGAACCAAAAACATATCCAACATCACAGAGATTCAGAAAGCTGAGGATTTTGTGAGGAGTTTGATCACAAAAGCAACTGAGGAAACCAACCAGTTGTACTATAAGGATGGCTTCAATTTGAGTGCTACTGAGGAAAGGTATGGCGTGGTGCAATGCACTAGAGATCTCACAAATGAAGGGTGCAGACAGTGTTTGGAGGCCATATTTGCTGAATTTCCCAAATGTTGTGAACAAAAAGTAGGATGGATGATTTGGTCTTCTAGTTGTTTGATAAACTATGATGATCATATGTTCTATCTTCTTAGCAACCAAACACCTTCAGCTCCTGTGCCTAATCCACAAACAGATGAACAAGGTGGTGATAAGAGGTCAAAAACCTTGATCATTAGCTTCAGTGTGATTGGGCCAATAACTCTACTATGTTTCAGCGTATATTGCTTCTGGTACAGGAAAAGAGTTAGAAAAGCTAATTATCAAGAAGAAACAAGGCATAGAGTTAGAGAAGAAGGGCTTCGTCTATTCTCACAAACTGAGGAAACATGGAACACAGACCTGCCTATAATGCCATTAATGACAATTCTACAGAGTACTGATAACTTTTCAGAAGCATCTAAATTAGGGGAAGGTGGATTTGGCCCTGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTCAAAAGGCTCTCAAAATTTTCTGGTCAAGGCTCAGAGGAGTTCAATAATGAAGTAATGTTTATATCTAAATTGCGGCATCGCAACCTTGTAAGACTTTTGGCATGTTGCTTAGAGGAAAATGAAAAGATACTTGTATATGAGTATTTACCGAACAAAAGTCTTGACTTTCACCTGTTTGATGATGAGAAAAGAAAGCAACTCAATTGGAAACTAAGATTAAACATTATCAATGGAATAGCAAGAGGTATTTTATACCTTCACAAGGATTCTCAACTCAGAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGATGATGAGATGAATCCCAAAATATCAGATTTCGGATTGGCAAGGGCAGTTGAAATAGGACAGAACCAGGCAAATACAAAACGAGTAATGGGCACTTAG 1530 0.402 MVVTQLNLRSILLLSFILIALITKAQAQPPLGSNCQNTTQQPLSNAYQTNLDRIFTWMSSDAGTSQGYNHTTIGTNSSVYGLYDCGGDVVGYFCQFCVSNAVKEATRLCPSRVSAVVWNDYCIIRYSNESFFGEFLTHPTWHTLGTKNISNITEIQKAEDFVRSLITKATEETNQLYYKDGFNLSATEERYGVVQCTRDLTNEGCRQCLEAIFAEFPKCCEQKVGWMIWSSSCLINYDDHMFYLLSNQTPSAPVPNPQTDEQGGDKRSKTLIISFSVIGPITLLCFSVYCFWYRKRVRKANYQEETRHRVREEGLRLFSQTEETWNTDLPIMPLMTILQSTDNFSEASKLGEGGFGPVYKGILPDGRQIAVKRLSKFSGQGSEEFNNEVMFISKLRHRNLVRLLACCLEENEKILVYEYLPNKSLDFHLFDDEKRKQLNWKLRLNIINGIARGILYLHKDSQLRVIHRDLKASNVLLDDEMNPKISDFGLARAVEIGQNQANTKRVMGT 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo243g00006 509 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 308 419 - -
Pumo243g00006 509 Gene3D Phosphorylase Kinase; domain 1 303 419 - -
Pumo243g00006 509 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 420 509 - -
Pumo243g00006 509 FunFam Cysteine-rich receptor-like protein kinase 28 31 130 - -
Pumo243g00006 509 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Pumo243g00006 509 FunFam Cysteine-rich receptor-like protein kinase 10 140 242 - -
Pumo243g00006 509 Gene3D Transferase(Phosphotransferase) domain 1 420 509 - -
Pumo243g00006 509 Gene3D - 31 131 IPR038408 -
Pumo243g00006 509 Gene3D - 139 242 IPR038408 -
Pumo243g00006 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pumo243g00006 509 SMART serkin_6 344 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo243g00006 509 SUPERFAMILY Protein kinase-like (PK-like) 325 509 IPR011009 -
Pumo243g00006 509 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 509 - -
Pumo243g00006 509 Pfam Protein kinase domain 345 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo243g00006 509 Pfam Salt stress response/antifungal 35 128 IPR002902 -
Pumo243g00006 509 Pfam Salt stress response/antifungal 157 239 IPR002902 -
Pumo243g00006 509 ProSiteProfiles Protein kinase domain profile. 344 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo243g00006 509 ProSiteProfiles Gnk2-homologous domain profile. 137 242 IPR002902 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo243g00006 10 509 Receptor kinase-like Gene Family AT4G05200 38.878 4.20e-115 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo243g00006 Pkinase 3.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo243g00006 - - pvu:PHAVU_011G194300g 707.212