Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo243g00004 ATGTTTTTGAATCATCTTCTGTGCACCATGGTGGGAACACAACTAAACATGAGATCAATATGTATTGGTTTCTTGTTAAAGCTGAGTTTCAGATCACTCATTACAAAGGCACAAACACCCATTTACCGGGGAAGTTACTGCCAAAACACCACCCAACAACCTCTCAGCAGTGAATACCAAACCAATCTTGATAGAATCCTCACATGGATGTCCTCTGATGCAGCCACAACCAAAGGTTATAACCACATCACCATAGGCAACAACAACACTGTGTATGGCCTCTATAATTGCCGTGGCGACGTGGTTGGATACTTTTGTCAATTTTGTGTTTCTAATGCTGCCAGAGAAGTTCCTCAGCGCTGCCCCAATAGGGTGTCTGCTATTGTTTGGTTTGATTTTTGCATTCTAAGGTACTCAAATGAGAGCTTCTTTGGGAAAGTTCTGACATACCCGACATGGCATGATTTTGGAACAAAAAACATAACCAACTTGGAAGAGATTCAGAAAGGTGAGGATTTTATGAAGAGTTTGATCAGAAAAGCAACTGTGGAGACCAACCTTTTGTACTATATGGATGGCTTCAATTTGAGTTCCACTCAGAGAAGGTATGGCTTGGTGCAATGCAGTAGAGATCTCACAAATGATGGGTGCAGACAGTGTTTGGAGGCCATGTTAGCACAAGTTCCCAAATTAGTGAAATTAGGATGGTTTATTTGGTCTGGAACTTGTATGATAAAGTATGATGACTATATGTTCTACCTTATTAACAACCAAACATCTTCAGTTACTGTGCCAAATCCCCAAAGAGATAAACATGGGGGTAATAAGAGGTCACAAATCTTGATCATTAGCTTCTCTGTGATGGGGTCAATTACATTACTATGTTTCAGTGTATATTGCTTTTGGTACAGAAGAAGAGGTAGAGAAGAAGGGCTTCTTCTATCTTCATTTCATAAAATTCAAACAGAGGAAACAGTGAACACAGACCTGCCTATAATCCCATTAATCACAATTCTACAGAGTACTGATAACTTTTCAGAAGCATCTAAATTAGGGGAAGGTGGATTTGGCTCCGTTTACAAGGGAATTCTACCAGATGGAAGGCATGTTGCAGTCAAAAGGCTCTCAAAATTTTCTGGTCAAGGCTCAGAGGAGTTCAATAATGAAGTGCTGTCTATAGCTAAATTGCAACATCGCAACCTTGTAAGACTCTTGGCATGCTGCTTGGAGGAAAATGAAAAGATACTTGTATATGAATATATGCCAAACAAAAGTCTCTACTTTCACCTGTTTGATGATGAGAAAAGAAAGCAGCTCAATTGGAAACTGAGATTAAGCATTATCAATGGAATAGCAAGAGGTGTTTTATACCTTCACGAGGACTCTCGACTCAGAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACCACGATATGAATCCCAAGATATCAGATTTTGGATTGGCAAAGGCATTTGAAGTAGGACAGAACCAGGCAAATACAAAACGAGTAATGGGCACTTATGGATACATGGCTCCTGAGTATGCTATGCAAGGAGTATTTTCAATGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGTAGAAAGAGTAGTGGGTTCTATCTGTCAGAGCATGGTGAAACTCTTCTTTTATACGCTTGGAGAATGTGGCGTGCAGGAAAATGTTTGGAATTGATGGATCCAGTGCTGGAAAAATCCTTCATAGACAGTGAAGTTGAGAGGTGCATACACATTGGTTTGTTGTGTGTTCAAGAAAATGCAAAATATAGACCAACCATGTCCGATGTTGTTGTAAAGCTGGCGAGTGACAGAAAGGCCCTTCCAAAACCCAAGCACCCAGCATTTTCAATTGGAAGAGTGGCCTCAGAGGAAGAACCTACAACAAAAAGATCCATGAATCTTTTCAGTAATGGTGTAACAGTCTCTATTACTTTACCAAGATAG 1992 0.3976 MFLNHLLCTMVGTQLNMRSICIGFLLKLSFRSLITKAQTPIYRGSYCQNTTQQPLSSEYQTNLDRILTWMSSDAATTKGYNHITIGNNNTVYGLYNCRGDVVGYFCQFCVSNAAREVPQRCPNRVSAIVWFDFCILRYSNESFFGKVLTYPTWHDFGTKNITNLEEIQKGEDFMKSLIRKATVETNLLYYMDGFNLSSTQRRYGLVQCSRDLTNDGCRQCLEAMLAQVPKLVKLGWFIWSGTCMIKYDDYMFYLINNQTSSVTVPNPQRDKHGGNKRSQILIISFSVMGSITLLCFSVYCFWYRRRGREEGLLLSSFHKIQTEETVNTDLPIIPLITILQSTDNFSEASKLGEGGFGSVYKGILPDGRHVAVKRLSKFSGQGSEEFNNEVLSIAKLQHRNLVRLLACCLEENEKILVYEYMPNKSLYFHLFDDEKRKQLNWKLRLSIINGIARGVLYLHEDSRLRVIHRDLKASNVLLDHDMNPKISDFGLAKAFEVGQNQANTKRVMGTYGYMAPEYAMQGVFSMKSDVFSFGVLVLEIICGRKSSGFYLSEHGETLLLYAWRMWRAGKCLELMDPVLEKSFIDSEVERCIHIGLLCVQENAKYRPTMSDVVVKLASDRKALPKPKHPAFSIGRVASEEEPTTKRSMNLFSNGVTVSITLPR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo243g00004 663 ProSiteProfiles Gnk2-homologous domain profile. 41 143 IPR002902 -
Pumo243g00004 663 SUPERFAMILY Protein kinase-like (PK-like) 320 615 IPR011009 -
Pumo243g00004 663 Gene3D Transferase(Phosphotransferase) domain 1 421 628 - -
Pumo243g00004 663 FunFam Cysteine-rich receptor-like protein kinase 28 43 142 - -
Pumo243g00004 663 Pfam Salt stress response/antifungal 47 140 IPR002902 -
Pumo243g00004 663 Pfam Salt stress response/antifungal 173 250 IPR002902 -
Pumo243g00004 663 ProSiteProfiles Protein kinase domain profile. 345 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo243g00004 663 FunFam Liguleless narrow1 421 624 - -
Pumo243g00004 663 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Pumo243g00004 663 SMART serkin_6 345 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo243g00004 663 CDD STKc_IRAK 351 616 - -
Pumo243g00004 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 47 658 - -
Pumo243g00004 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Pumo243g00004 663 Gene3D - 152 252 IPR038408 -
Pumo243g00004 663 Gene3D - 41 143 IPR038408 -
Pumo243g00004 663 Gene3D Phosphorylase Kinase; domain 1 313 420 - -
Pumo243g00004 663 Pfam Protein tyrosine and serine/threonine kinase 349 616 IPR001245 GO:0004672|GO:0006468
Pumo243g00004 663 ProSiteProfiles Gnk2-homologous domain profile. 149 252 IPR002902 -
Pumo243g00004 663 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 420 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo243g00004 30 663 Receptor kinase-like Gene Family AT4G05200 41.478 8.65e-169 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo243g00004 PK_Tyr_Ser-Thr 6.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo243g00004 - - gmx:100795922 942.184