Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo243g00001 ATGGATGGCTTCAATTTGATTTCCACTCAGAGAAGGTATGGCTTGGTGCAGTGCACCAGAGATCTCACCAATGAAGAGTGCAGACAGTGTTTGGAGGCCATGCTAGCACAAGTTCCCAAATGTTGTGAACAGAAATTGGGGTGGTTTGTTGGGGCTGCAAGTTGTATAGTAAAGTATGATGATTATATGTTCTACTCCAATAATCAATCATCTTCAGTTCCTGTGCCAAATCTAACAGGCAAACAAGGGGGTGCTAGTAAGTCAAGAAACTTGATCATTGCATTAAGTGTGTTGGGGCTAATTGCTCTGCTGAGTTTGTGTGTCTACTACTTTTGGTGCAGGAATAGAGTTAGGAAAGATGGGCTAAAACCTCCTCTCTCTGCTTATGATCAAAATATTCAAATTGAGGAAACACTCAATACAGACTTGCCTACAATCCCACTAATCACAATTCTAGAGAGTACTGATAACTTTTCACTAGCATCTAAATTAGGGGAAGGTGGATTTGGCCCCGTCTACAAGGGAATTCTACCAGATGGAAGACATATTGCTGTCAAAAGGCTCTCAAAAGCTTCTAGTCAAGGCTCAGAGGAGTTTAAGAATGAAGTAACATTTATAGCTAAATTGCAACATCGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAATGAAAAGATTCTCGTATATGAGTATTTGTCTAATGCAAGTCTTAATTTTCACCTATTTGATAGTGAAAAAAGAAAGCAACTCGATTGGAAACTTAGATTAAGCATTATCAATGGAATAGCAAGGGGTCTTTTATATCTTCACGAGGACTCTCGACTCAAGGTAATTCACAGAGATCTCAAAGCTAGCAATGTTCTATTAGACGATGAGATGAATCCCAAAATATCAGATTTTGGATTGGCAAGGGCATTTGAAAAAGGCCAGAACCAAGCAAATACAAATCGAGTAATGGGCACTTATGGATACATGGCTCCAGAATATGCTATGGAAGGATTGTTTTCAATGAAATCTGATGTTTTCAGCTTTGGAGTTCTTGTTCTAGAAATCATTTGTGGAAGAAAGAACAGTGGATTTTTTCTATCAGAACATGGTCAAAGTCTTCTTTTATATACTTGGAGAATGTGGTGTGAAGGAAAATGTTTGGAATTAATGGATCCAGTGCTGGAAAATTCCTACATATCCAATGAAGTTATGAAGTGCATACAGATTGGTTTGTTGTGTGTTCAAGAAGAAGCAGCAGATAGACCAACCATGTCCACTGTTGTTGTATTGTTGGCAAGTGACACAATGACCCTTCCAAAACCTAACAAACCTGCATTCTCAGTTGGAAGAATGTCCTCATCAGAGGAAGCATCTATTTCAGAAGGTTCCAAAAATGTTTCCATCAATGAGTTATCAATCTCTAGTATTGTACCAATGTAA 1434 0.3863 MDGFNLISTQRRYGLVQCTRDLTNEECRQCLEAMLAQVPKCCEQKLGWFVGAASCIVKYDDYMFYSNNQSSSVPVPNLTGKQGGASKSRNLIIALSVLGLIALLSLCVYYFWCRNRVRKDGLKPPLSAYDQNIQIEETLNTDLPTIPLITILESTDNFSLASKLGEGGFGPVYKGILPDGRHIAVKRLSKASSQGSEEFKNEVTFIAKLQHRNLVRLLACCLEENEKILVYEYLSNASLNFHLFDSEKRKQLDWKLRLSIINGIARGLLYLHEDSRLKVIHRDLKASNVLLDDEMNPKISDFGLARAFEKGQNQANTNRVMGTYGYMAPEYAMEGLFSMKSDVFSFGVLVLEIICGRKNSGFFLSEHGQSLLLYTWRMWCEGKCLELMDPVLENSYISNEVMKCIQIGLLCVQEEAADRPTMSTVVVLLASDTMTLPKPNKPAFSVGRMSSSEEASISEGSKNVSINELSISSIVPM 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo243g00001 477 Pfam Protein tyrosine and serine/threonine kinase 160 427 IPR001245 GO:0004672|GO:0006468
Pumo243g00001 477 FunFam Liguleless narrow1 234 437 - -
Pumo243g00001 477 CDD STKc_IRAK 164 426 - -
Pumo243g00001 477 Gene3D Phosphorylase Kinase; domain 1 126 233 - -
Pumo243g00001 477 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 11 472 - -
Pumo243g00001 477 Gene3D - 3 64 IPR038408 -
Pumo243g00001 477 SUPERFAMILY Protein kinase-like (PK-like) 143 448 IPR011009 -
Pumo243g00001 477 Gene3D Transferase(Phosphotransferase) domain 1 234 438 - -
Pumo243g00001 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Pumo243g00001 477 Pfam Salt stress response/antifungal 10 62 IPR002902 -
Pumo243g00001 477 ProSiteProfiles Gnk2-homologous domain profile. 1 64 IPR002902 -
Pumo243g00001 477 SMART serkin_6 158 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo243g00001 477 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 126 233 - -
Pumo243g00001 477 ProSiteProfiles Protein kinase domain profile. 158 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo243g00001 5 476 Receptor kinase-like Gene Family AT4G05200 45.473 3.98e-147 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo243g00001 PK_Tyr_Ser-Thr 9.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo243g00001 - - gmx:100792758 753.436