Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo242g00005 ATGGGTGGTGAAGGAAGAAACAGAAGAGTGCTTAATGATATTGGGAATCTTGTATACAAACAAGGCCATGGAATTAATGCGTCTAAGGCTGTCACAAGAAATTTCTTTTCTTTTGTAATGGATGTCTCTAAATCTGTGTGGGTGGATGTTATCCAGAAGTCAGTGGAGAATGACATGGTGGTAGCAACTGATGGGAATTTTGTTGCTGCAACAAAGCTGGAAGCAGCTCAGAAGGTTAAAGAAGAACCTGAAGTGATTCTCATTAGCTCTGATGATGAATGGCAAGAAGAGAAGCAGAAGCAAGCTGTTAAAGGAAAAAAGGCAAAGGCATTCAGTTCAGTCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACTCCCAAGCGATTTGGTATTCAACATTGATGAAGCTTACATGGACAATGAATTGGCAGCAGCCGAGTATATTGATGATATTTATAAATTTTACAAAGAGACCGAAGAAGATGGCTGTGTGCATGATTACATGGGTTCACAGCCAGATATTAATGCCGAGATGAGATCAATCCTTGTGAACTGGTTGATAGAAGTGCATAAAAAATTTGAGCTCAGGCCAGAAACGTTGTATTTGACCCTGAACATTGTTGATCGGTTCCTGTCTGTGAAGGCTGTGTCAAAAAGGGAACTTCAGCTGGTTGGCATCAGCTCAATGCTGATAGCCTCAAAATATGAAGAGATATGGGCATCACAGGTGGAATTCTTTCTCTTCTATGATTTTTGGTAA 759 0.4111 MGGEGRNRRVLNDIGNLVYKQGHGINASKAVTRNFFSFVMDVSKSVWVDVIQKSVENDMVVATDGNFVAATKLEAAQKVKEEPEVILISSDDEWQEEKQKQAVKGKKAKAFSSVLSARSKAACGLPSDLVFNIDEAYMDNELAAAEYIDDIYKFYKETEEDGCVHDYMGSQPDINAEMRSILVNWLIEVHKKFELRPETLYLTLNIVDRFLSVKAVSKRELQLVGISSMLIASKYEEIWASQVEFFLFYDFW 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo242g00005 252 Pfam Cyclin, N-terminal domain 150 249 IPR006671 -
Pumo242g00005 252 SUPERFAMILY Cyclin-like 139 248 IPR036915 -
Pumo242g00005 252 ProSitePatterns Cyclins signature. 179 210 IPR006671 -
Pumo242g00005 252 Gene3D - 150 163 - -
Pumo242g00005 252 PANTHER CYCLINS 101 241 IPR039361 -
Pumo242g00005 252 Gene3D - 164 248 - -
Pumo242g00005 252 PIRSF Cyclin_A_B_D_E 1 249 IPR046965 GO:0016538|GO:0044772
Pumo242g00005 252 SMART cyclin_7 184 251 IPR013763 -
Pumo242g00005 252 FunFam G2/mitotic-specific cyclin 163 250 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo242g00005 2 248 Core Cell Cycle Gene Families AT5G06150 45.211 6.46e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo242g00005 K21777 - gmx:547782 337.806