Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo231g00003 ATGTCTTCACAGGACCAAGATTTTCTCCATTTAAAAGAGAATCCTCACCCTCCGTCACACGCATGGTGGGGTCCTAACTTTGAAGGCTCATTTAGGAATTCAGAAATCAGAATCCATGAAGTGTTCTTGAGCTTCAGAGGGGAAGACACACGTGCTTCTTTCATTTCACACCTCTATGCTTATCTTCAGAACGAAGGAATCAATGTTTTCAAGGATGATGAATCGCTTCCAAGGGGAGAAGACATTTCAGACTCACTGCTGCGAGCAATCGAACAGTCTAAAATTGCTGTTGTTGTATTCTCAAGAAATTATGCAGACTCGAGATGGTGCCTGCAAGAGTTAGTGAAAATAATGAAGTGTCACAGAACCATAGGGCAGGTGGTAGTGCCAGTGTTCTATGATGTTGATCCCTCTGAAGTGCGTCATCAAACGGGTGAGTTTGGAAAAGCATTTCAAAACCATTTGAACATAAAAGATGATAAAGAGGCGGAACTGAGATGGAAGGAAAAAGGCATGTCCGAAATGGAGATTGAATATATGTTGACCACCACCGTTTCAAGGAGGAAATACGAGGTGCTGCTTTGGGGGCAGGTACTTCGTGAGGCTGCTGGCATCTCAGGGGTTGTAGTCCTCAATTCTAGAAATGAAAGTGAGGCTATCAAAAACATTGTTGAAAATGTCACACGTTTGTTAGACAAGATAGAGTTGTTCATTGCCGATAATCCAGTGGGAGTAGAATCTCGAGTACAAAAGATTATTCAGCTGCTAGACCATAACCTATCAAACAAAGTTCTACTACTTGGGATGTGGGGGATGGGAGGCATTGGTAAAACTACCATTGCAAAAGCCATTTACAATAAGATTGGTCATAGTTTTGAGGGAAGGAGCTTCCTTGCACATATTGGGGAAGTTTGGGTGCAAGATGCTGGACAAGTCTATTTACAAGAGCAACTTTTGTTTGATATCTGCAAAGAAACAAAAACAAGGATAGGTAATGTTGAATCAGGAAAAAAATTATTGAAGGAAAGACTTCACAATAAGAGGGTACTTCTTATACTTGATGATGTGAATAATTTGTACCAATTGAATACTTTGTGTGGAGGTCGTGAATGGTTTGGTTTAGGGAGTAGAATAATCATCACAACCAGAGATATGCATGTACTTAGAGGGAGAAGAGTTGACAAAGTGTACACTATGAAAGGAATGAATGAAAGTGAATCTATTGAGCTTTTTAGTTGGCATGCATTCAAGCAACCAAGTCCTAGAGAAGATTTTACCGATCTTTCTAGAAATGTAATTGCTTATTCTGGGGGATTGCCACTGGCTCTTGAAGTTCTTGGGTGTTATTTGTTTGATATGGAGGCAACAGAGTGGAAGGGTGTATTGGATAAACTCAAAAGAATTCCCAATGATCAAGTTCAGAAGAAATTAAAAATAAGCTATGATGGTTTAAATGATGATACTGAGAGAGAAATATTTCTTGATATAGCTTGTTTCTTTATCGGGATGGATCGAAATGATGTTATACATATACTAAATGGTTGTGGACTTTTTGCTGAAAATGGAATTCGTGTCCTCATAGAGCGAAGCCTTGTAACTGTTGATGATAAGAACAAGCTTGGAATGCATGATTTGTTGCGAGACATGGGAAGGGAAATCGTTCGTGCAAAATCACCAAAGGAGCTTGAGGAGCATAGCAGGTTATGGTTTCATGAGGATGTGCTTGATGTATTATTAAAAGAAACTGGAACAAAAGCTGTTGAGGGAATGACTTTGATGTTGCCAAGAACTAATTCAAAATATTTGAGTACTGCAGCTTTTAAGAAGATGAAGAAACTTAGGTTGCTTCAACTTGCTGGTGTTCAACTTGATGGAGATTTTAAACATCTTTCAAAAGATTTGAGATGGCTATGTTGGCATGGATTTCCTTTAAAATTCATACCAACAGACTTTTATCAAGGAAGTTTAGTTTCCATTGAGTTAGAAAACAACAATCTTAAACTTGTGTGGAAAGAGGCCCAGTTGATGGAAAAGCTGAAAATTCTCAATCTTAGTCATTCTCATTATATGACAGAGACCCCAGACTTTTCAAACTTACCTAATCTTGAAAAGCTAATACTCATAGATTGTCCAAGACTATCCATGATTTCCCACACCATTGGACAACTCAGTGAAGTCGTTCTGATAAATTTGAAAGACTGTATCAGCCTTCGTAACCTTCCAAGAAGCATCTATAAGTTGAAATCTCTTAAAACTCTCATTCTTTCTGGATGTTTAATGATTGACAAGTTGGAAGAGGACTTGGAACAAATGAAATCTTTGACAATCCTAATTGCGGATAAGACTGCAATAACAAGAGTGCCCCTTTCAGTAGTACGGTCAAAAAGCATTGGATATATTTCTCTGTGCGGCCATGAAGGCTTCTCACGTGATGTGTTTCCTTCTATCATTTGGTCTTGGATGTCACCAACAAATAATCCTTCATGCCTAGCCCAATCATATGTGGGCATGTCATCTCTTGTTTCTTTAAATGTACCAAATAGTAGTTCCCACAATCTACCAACTATTTCCAAAGACCTTCCAAAGCTTCGAAGTCTTTGGGTGGAGTGCAGCTCAAAACCTCACCTATCTCGAGATACAAGAATAATTTTGGATGCTTTATATGCCGCCACAAATTTTGAAGAATTGGAATCACCAAGAACTACATCACAAGTGCCAAATGTAAAAACTTCTACATTAATTGAATGTAGTAGTCAAGTGCATGTTTCTAGATCAAAAAGTTCTTCGAAATCTCTTTTAATTCATATGGGAATGAATTGTCATGGCTCCAATATTCTAAAAGAAAGCATTCTACAGAATATGACTACTAGTGGGTTTGACAGTGGTTTACTCCCAGATGACAATTATCCTGATTGGTTAACCTTCAATTGTGATGGTTCTTCTGTAATTTTTGATGTCCCTCAAGTGAATGGGCGTAACTTAAAGTCAATGATGTGTATTATCCACACTTTTACCCCTGACAACATAACATCAGATGGCTTAAAAAATGTGTTGCTGATAAATCACACAAAACCCACCATTCAGCTTTATAAGAGAGACACATTAGCATCCTTTGAAGATGAGGAATGGCAGAGAGTAGTATCAAATATAGAACCTGGTAACAGAGTGGAGGTTGTTGTTGTTTTTGAGAATGGATTCATTGTGAAGAAGACAACAGTTTATCTCGTTTATGATGAACCAATTGACAAAGAATTAGAGTATTGCCATGCTTATGATAAGAATGTTATTGTTTCCGGTGGTGATGAAAATATATCCACAGTTAGGTGGATCTCTCCTCAAGAGGAATCCGCCAATGACTCTAAACAAAAACAGAAAAGAAGAAAATTTGAATGA 3393 0.3802 MSSQDQDFLHLKENPHPPSHAWWGPNFEGSFRNSEIRIHEVFLSFRGEDTRASFISHLYAYLQNEGINVFKDDESLPRGEDISDSLLRAIEQSKIAVVVFSRNYADSRWCLQELVKIMKCHRTIGQVVVPVFYDVDPSEVRHQTGEFGKAFQNHLNIKDDKEAELRWKEKGMSEMEIEYMLTTTVSRRKYEVLLWGQVLREAAGISGVVVLNSRNESEAIKNIVENVTRLLDKIELFIADNPVGVESRVQKIIQLLDHNLSNKVLLLGMWGMGGIGKTTIAKAIYNKIGHSFEGRSFLAHIGEVWVQDAGQVYLQEQLLFDICKETKTRIGNVESGKKLLKERLHNKRVLLILDDVNNLYQLNTLCGGREWFGLGSRIIITTRDMHVLRGRRVDKVYTMKGMNESESIELFSWHAFKQPSPREDFTDLSRNVIAYSGGLPLALEVLGCYLFDMEATEWKGVLDKLKRIPNDQVQKKLKISYDGLNDDTEREIFLDIACFFIGMDRNDVIHILNGCGLFAENGIRVLIERSLVTVDDKNKLGMHDLLRDMGREIVRAKSPKELEEHSRLWFHEDVLDVLLKETGTKAVEGMTLMLPRTNSKYLSTAAFKKMKKLRLLQLAGVQLDGDFKHLSKDLRWLCWHGFPLKFIPTDFYQGSLVSIELENNNLKLVWKEAQLMEKLKILNLSHSHYMTETPDFSNLPNLEKLILIDCPRLSMISHTIGQLSEVVLINLKDCISLRNLPRSIYKLKSLKTLILSGCLMIDKLEEDLEQMKSLTILIADKTAITRVPLSVVRSKSIGYISLCGHEGFSRDVFPSIIWSWMSPTNNPSCLAQSYVGMSSLVSLNVPNSSSHNLPTISKDLPKLRSLWVECSSKPHLSRDTRIILDALYAATNFEELESPRTTSQVPNVKTSTLIECSSQVHVSRSKSSSKSLLIHMGMNCHGSNILKESILQNMTTSGFDSGLLPDDNYPDWLTFNCDGSSVIFDVPQVNGRNLKSMMCIIHTFTPDNITSDGLKNVLLINHTKPTIQLYKRDTLASFEDEEWQRVVSNIEPGNRVEVVVVFENGFIVKKTTVYLVYDEPIDKELEYCHAYDKNVIVSGGDENISTVRWISPQEESANDSKQKQKRRKFE 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo231g00003 1130 Gene3D - 238 395 IPR027417 -
Pumo231g00003 1130 FunFam Disease resistance protein (TIR-NBS-LRR class) 35 233 - -
Pumo231g00003 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 496 IPR027417 -
Pumo231g00003 1130 SMART till_3 38 178 IPR000157 GO:0007165
Pumo231g00003 1130 MobiDBLite consensus disorder prediction 1111 1130 - -
Pumo231g00003 1130 SUPERFAMILY Toll/Interleukin receptor TIR domain 38 161 IPR035897 -
Pumo231g00003 1130 SUPERFAMILY L domain-like 591 880 - -
Pumo231g00003 1130 Gene3D Ribonuclease Inhibitor 579 957 IPR032675 -
Pumo231g00003 1130 Pfam NB-ARC domain 246 481 IPR002182 GO:0043531
Pumo231g00003 1130 Gene3D - 401 485 IPR042197 -
Pumo231g00003 1130 Gene3D - 33 237 IPR035897 -
Pumo231g00003 1130 SUPERFAMILY "Winged helix" DNA-binding domain 472 578 IPR036390 -
Pumo231g00003 1130 PRINTS Disease resistance protein signature 436 450 - -
Pumo231g00003 1130 PRINTS Disease resistance protein signature 266 281 - -
Pumo231g00003 1130 PRINTS Disease resistance protein signature 343 357 - -
Pumo231g00003 1130 PRINTS Disease resistance protein signature 745 761 - -
Pumo231g00003 1130 ProSiteProfiles TIR domain profile. 37 231 IPR000157 GO:0007165
Pumo231g00003 1130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 39 778 IPR044974 GO:0006952
Pumo231g00003 1130 Pfam TIR domain 39 227 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo231g00003 11 791 WRKY Transcription Factor Family AT4G12020 29.602 2.17e-77 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo231g00003 - - gmx:100800964 1721.06