Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo22g00003 ATGGAGGCAATTAGGATAAGCTGTGCTGGGTATCCTACTAGAAAAACCTTTGATGAATTTGTGGATCGATTTAGCCTTCTTGCACCAGAAGCTTTGGATGGAAGTTCTGATGAGGTCACTACTTGCAAGAGAATTCTAAAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAGACAAAGGTGTTTCTTCGAGCTGGTCAGATGGCAGAACTAGATACCTGTAGAAGTGAAATCTTAGGAAGGTCAGCAAGCATTATTCAGAGAACAGTTCGTTCCTATGTGGTCCGCCAAAGTTTCATCTTGCTTCGGTTGTTTGCTGTGCAGATCCAAGCTACGTGCAGAGGACAACTTGCTCGGCAAGTTTATGAGGGAATGCGGCAGGAGGCTTCTAGTTTGGTGATTCGGAGGTGCTTCCGCATGCATATTGCTAGGAAGGCATACAAAGATTTGTATACCTCTGCTGTCTCTATCCAGACTGGTATGCTGGGGATGGCTGCTCGTTGTGAGCTACACTTTAGAAGGCGGACTAAAGCAGCAATTGTCATTCAGAGCCACTGCCGGAAATACTTGGCACAACTTCATTTCACAGAATTAAAGAAGGCAGCAATTACAACACAATGTGCATGGAGAGGAAAAGTTGCTCGGCGAGAATTGCGAAAGCTCAAGATGGGACCTGCTCAGGCGCAGAATTTGCGGGACTCGCTTGCCGATGCAAAGTCTGATATTGTGGTTAAGGTTGGGCTCAGGAAAGGTTCTCGTTCCTTTAATGAGGCTCGTGCAGCTGGCTTTAGTGAGGAGAATGGAACTCTGGGTGACATATGGGAAACTATCTCAGGCAGTGATCTTGTGTTGCTGTTGATTTCTGATTCTGCACAGGCAGATAATTATGAAAAAATATTTTCCCACATGAAGTCAAATAGCATACTTGGGCTGTCCCATGGTTTTCTTCTTGGGCATTTACAGTCAATGGGACTTGATTTTCCCAAGCACTTCAGTGTAATTGCTGTATGCCCGAAAGGCATTTTACTTGGTGCTGTTCATGGTATTGTGGAATCCTTGTTTAGGAGGTACACTGAACATGGAATGAGTGAAGATTTGGCTTATAACAACACTGTCGAGTCCATTACAGGAACTATATCTAAAATCATCTCGACCAAGGGCATGCTGGCTGTATACAATGCTTTATCTGAAGACGAAAAAAGGGAATTTGAGAAAGCATATAGTGCTTCATATTATCCCTGCATGGACATTTTGTATGAGTGCTATGAGGATATTGCTGCTGGCAGTGAGATTCGCAGTGTTGTCTTGGCTGGGCGTCGCTTTTATCTAAAGGGTCTGCCAGCTTTTCCCATGGGTAAGATTGATCAGACCCGGATGTGGAAGGTTGGTGAGCGTGTCCGATCTACAAGGCCAGCAGGTGATCTAGGCCCATTATACCCATTTACTGCTGGGGTCTACGTGGCATTGATGATGGCCCAGATTGAGATCCTGAGGAAGAAGGGGCATTCTTACTCTGAAATCATTAACGAGAGTGTCATTGAGTCTGTTGATTCTTTGAATCCTTTCATGCATGCTCGTGGTGTTTCTTTCATGGTTGATAACTGTTCAACCACAGCAAGGTTGGGTTCAAGGAAATGGGCTCCTCGATTTGATTACATCCTAACCCAACAGGCCTTGGTGGCTGTGGACAATGGTGCACCTATCAACCAAGACCTAATCAGCAACTTCCTGTCAGACCAAGTGCATGGAGCCATTGAAGTTTGTGCCCAACTGAGACCTACAGTAGACATTTCTGTGCCACCAGATGCAGACTTTGTCCGTCCTGAGTTGCGTCAGTCTAGCAATTAG 1848 0.4524 MEAIRISCAGYPTRKTFDEFVDRFSLLAPEALDGSSDEVTTCKRILKNVGLEGYQIGKTKVFLRAGQMAELDTCRSEILGRSASIIQRTVRSYVVRQSFILLRLFAVQIQATCRGQLARQVYEGMRQEASSLVIRRCFRMHIARKAYKDLYTSAVSIQTGMLGMAARCELHFRRRTKAAIVIQSHCRKYLAQLHFTELKKAAITTQCAWRGKVARRELRKLKMGPAQAQNLRDSLADAKSDIVVKVGLRKGSRSFNEARAAGFSEENGTLGDIWETISGSDLVLLLISDSAQADNYEKIFSHMKSNSILGLSHGFLLGHLQSMGLDFPKHFSVIAVCPKGILLGAVHGIVESLFRRYTEHGMSEDLAYNNTVESITGTISKIISTKGMLAVYNALSEDEKREFEKAYSASYYPCMDILYECYEDIAAGSEIRSVVLAGRRFYLKGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLYPFTAGVYVALMMAQIEILRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYILTQQALVAVDNGAPINQDLISNFLSDQVHGAIEVCAQLRPTVDISVPPDADFVRPELRQSSN 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo22g00003 615 ProSiteProfiles KARI N-terminal domain profile. 193 393 IPR013116 -
Pumo22g00003 615 PANTHER KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL 340 503 IPR013023 GO:0009082|GO:0016491
Pumo22g00003 615 Pfam Myosin head (motor domain) 1 64 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo22g00003 615 ProSiteProfiles Myosin motor domain profile. 1 76 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pumo22g00003 615 ProSiteProfiles IQ motif profile. 127 156 IPR000048 GO:0005515
Pumo22g00003 615 SMART iq_5 126 148 IPR000048 GO:0005515
Pumo22g00003 615 SMART iq_5 78 100 IPR000048 GO:0005515
Pumo22g00003 615 SMART iq_5 174 196 IPR000048 GO:0005515
Pumo22g00003 615 SMART iq_5 197 219 IPR000048 GO:0005515
Pumo22g00003 615 SMART iq_5 101 123 IPR000048 GO:0005515
Pumo22g00003 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 223 IPR027417 -
Pumo22g00003 615 ProSiteProfiles KARI C-terminal domain profile. 327 462 IPR000506 GO:0004455|GO:0009082
Pumo22g00003 615 ProSiteProfiles KARI C-terminal domain profile. 466 610 IPR000506 GO:0004455|GO:0009082
Pumo22g00003 615 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 340 471 IPR000506 GO:0004455|GO:0009082
Pumo22g00003 615 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 484 553 IPR000506 GO:0004455|GO:0009082
Pumo22g00003 615 Gene3D - 224 339 - -
Pumo22g00003 615 FunFam Ketol-acid reductoisomerase 330 593 - -
Pumo22g00003 615 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 340 612 IPR008927 -
Pumo22g00003 615 Pfam Acetohydroxy acid isomeroreductase, NADPH-binding domain 224 340 IPR013116 -
Pumo22g00003 615 Gene3D - 340 612 IPR013328 GO:0016491
Pumo22g00003 615 Gene3D - 11 74 - -
Pumo22g00003 615 Pfam IQ calmodulin-binding motif 130 148 IPR000048 GO:0005515
Pumo22g00003 615 Pfam IQ calmodulin-binding motif 200 219 IPR000048 GO:0005515
Pumo22g00003 615 Pfam IQ calmodulin-binding motif 176 195 IPR000048 GO:0005515
Pumo22g00003 615 Pfam IQ calmodulin-binding motif 81 99 IPR000048 GO:0005515
Pumo22g00003 615 Pfam IQ calmodulin-binding motif 106 122 IPR000048 GO:0005515
Pumo22g00003 615 ProSiteProfiles IQ motif profile. 102 131 IPR000048 GO:0005515
Pumo22g00003 615 ProSiteProfiles IQ motif profile. 198 227 IPR000048 GO:0005515
Pumo22g00003 615 FunFam unconventional myosin-Va 177 224 - -
Pumo22g00003 615 ProSiteProfiles IQ motif profile. 175 204 IPR000048 GO:0005515
Pumo22g00003 615 Gene3D - 79 128 - -
Pumo22g00003 615 Gene3D - 178 223 - -
Pumo22g00003 615 Gene3D - 129 177 - -
Pumo22g00003 615 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 130 IPR027417 -
Pumo22g00003 615 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 222 344 IPR036291 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo22g00003 1 273 Myosins gene family AT5G43900 59.928 1.73e-97 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo22g00003 K00053 - zju:107431588 591.267