Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo22g00001 ATGGGTAAGGCGTCAAAGTGGTTTTGCGGGCTTCTCGGTCTCAAAAAAACAGAGTATAGTGCCTCACCCGCCAAGCCACCCAAAGAGAAGCGCCGATGGAGCTTCTTTAAATCATCATCATCACACACAGAAAAAGACAATACCACTGCCGCCACGTGTCCACCACAAAGAGACAATAACAACGGTAACAACAAGCATGCCATGGCAGTGACAGCAGCCACCGCTGCAGTGGCGGAGGCGGCGGCTGCCGCTGAAGCGGCCGCCGTTGTGGTGAGACTAACAAGCAGCAGCGGCAGGTGCACCGATGCCGCCGGACCCACCAGGATTCGACAACATTGGGCTGCTGTTAAGATCCAAGCTGCTTTTCGAGGATGTTTGGCAAGGAGAGCACTGCATGCATTAAAGGGGTTGGTGAAGCTTCAAGCATTAGTGAGAGGTCACATTGAGAGGAAGCGGATAGTGGAGTGGCTGACAAGAGTGCAAGCAATCTTACATGCACAGGCACAAGTCTCTGCAGGGTTGACCCTGCATGCCTCACCTTCGAGTTCAAAGTTATCTAGCCACCTCCATGGTCCAGACACACCCGAAAAATGGTCATTTGAACAATCACGAAAAATTTCAAGATTTACCTCAGTTCCGTGA 642 0.5171 MGKASKWFCGLLGLKKTEYSASPAKPPKEKRRWSFFKSSSSHTEKDNTTAATCPPQRDNNNGNNKHAMAVTAATAAVAEAAAAAEAAAVVVRLTSSSGRCTDAAGPTRIRQHWAAVKIQAAFRGCLARRALHALKGLVKLQALVRGHIERKRIVEWLTRVQAILHAQAQVSAGLTLHASPSSSKLSSHLHGPDTPEKWSFEQSRKISRFTSVP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo22g00001 213 MobiDBLite consensus disorder prediction 40 64 - -
Pumo22g00001 213 MobiDBLite consensus disorder prediction 22 39 - -
Pumo22g00001 213 Pfam IQ calmodulin-binding motif 138 152 IPR000048 GO:0005515
Pumo22g00001 213 Pfam IQ calmodulin-binding motif 112 131 IPR000048 GO:0005515
Pumo22g00001 213 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 158 IPR027417 -
Pumo22g00001 213 PANTHER IQ-DOMAIN 5-RELATED 1 174 - -
Pumo22g00001 213 Gene3D - 108 163 - -
Pumo22g00001 213 SMART iq_5 133 154 IPR000048 GO:0005515
Pumo22g00001 213 SMART iq_5 110 132 IPR000048 GO:0005515
Pumo22g00001 213 MobiDBLite consensus disorder prediction 183 213 - -
Pumo22g00001 213 ProSiteProfiles IQ motif profile. 111 139 IPR000048 GO:0005515
Pumo22g00001 213 MobiDBLite consensus disorder prediction 19 64 - -
Pumo22g00001 213 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo22g00001 1 197 IQD Protein Family AT4G23060 40.076 9.39e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo22g00001 - - gmx:100776656 275.789