Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo227g00002 ATGAGAAATGGAAGCCTAGAGCAATGGCTGCATCCTTTCACACCAAGTGCAGAGCATCAGAGAACACTGAGCCTTGATCAAAGATTAAATATCATGATTGATGTTTCTTCTGCATTGCATTATCTTTATCATGAATGTGAGCAATCAATCATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGATTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTCTCTCAACCATCAATGGTACCACTTCTATGCACACAAGTACAATTGGAATAAAGGGGACTGTTGGCTATGCTCCTCCAGAGTATGGAATGGGTTCTAAGGTGTCTATGAATGGCGACATGTATAGCTTTGGGATTCTTATGTTGGAGATGCTTACTGGAAGAAGACCCACAGACGAAATCTTTGAAGATGGTCAAAATTTGCATAAGTTTGTGGTAAATTCATTGCCTGGTAATCTTTTACAGATTTTGGACTCATCACTTGTTCGAAAACATGAAGAAGCAACAATAGAAGAAGAAAACAGTCAGAATCTTACTCCAACTGTTGAAAAGTGCTTAGTTTCACTCTTTAAGATTGGAGTTGCTTGTTCAGTGGAATCTCCAAAAGAAAGAATGAGTATAGTGGATGTCACTAGAGAGCTAAGAAAAATAAGAAAAGTCTTTCTTGCTGTCATAATGTATAAGAAAACTCAATCTATGGATGCAACAATTGAGCAGCTTCTTCCTACTTTTCTCTCCCTTTTGAAGGATGAATTTCCTGATATGTTGCGCCTAAATATCATAAGCAAGCTTGATCAAGTGAATCAGGTTTGCAGAGTTTTTGAGTGTTTTGTTTGCAAATTGCTTTATAAGCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTTGTGGACTCCACTTGCTAGTTTGA 927 0.3786 MRNGSLEQWLHPFTPSAEHQRTLSLDQRLNIMIDVSSALHYLYHECEQSIIHCDLKPSNVLLDDDMIAHVSDFGIARLLSTINGTTSMHTSTIGIKGTVGYAPPEYGMGSKVSMNGDMYSFGILMLEMLTGRRPTDEIFEDGQNLHKFVVNSLPGNLLQILDSSLVRKHEEATIEEENSQNLTPTVEKCLVSLFKIGVACSVESPKERMSIVDVTRELRKIRKVFLAVIMYKKTQSMDATIEQLLPTFLSLLKDEFPDMLRLNIISKLDQVNQVCRVFECFVCKLLYKLGALCMQWLQDKVCGLHLLV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo227g00002 308 Pfam Protein kinase domain 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo227g00002 308 SMART serkin_6 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo227g00002 308 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1 230 - -
Pumo227g00002 308 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo227g00002 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 50 62 IPR008271 GO:0004672|GO:0006468
Pumo227g00002 308 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 223 - -
Pumo227g00002 308 Gene3D Transferase(Phosphotransferase) domain 1 1 238 - -
Pumo227g00002 308 SUPERFAMILY Protein kinase-like (PK-like) 1 218 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo227g00002 1 226 Receptor kinase-like Gene Family AT3G47570 47.598 2.85e-61 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pumo227g00002 Pkinase 9.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo227g00002 - - gmx:100801459 386.726