Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo225g00006 ATGGTGAGAACCCCGTGCTTAAGCAAAAGTGGACTGAAGAAAGGAACATGGACACCAGAGGAAGACAAGAAGTTAATCGATTATATTACTAAATATGGCCACTGGAATTGGAGCCTACTCCCCAAGTTCGCAGGTCTTGCGAGATGTGGAAAGAGTTGCAGACTTAGGTGGGTGAATTACCTAAGGCCGAACCTCAAAAGAGGGAACTACACTCAACAGGAGGAGGAAACTATTATCAAGCTGCACCAAAATCTGGTTTCTACATTTAACAAAATAATGTAA 282 0.4255 MVRTPCLSKSGLKKGTWTPEEDKKLIDYITKYGHWNWSLLPKFAGLARCGKSCRLRWVNYLRPNLKRGNYTQQEEETIIKLHQNLVSTFNKIM 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo225g00006 93 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pumo225g00006 93 SMART sant 13 63 IPR001005 -
Pumo225g00006 93 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pumo225g00006 93 CDD SANT 16 61 IPR001005 -
Pumo225g00006 93 Gene3D - 13 66 - -
Pumo225g00006 93 FunFam MYB-related transcription factor 13 66 - -
Pumo225g00006 93 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Pumo225g00006 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 92 - -
Pumo225g00006 93 SUPERFAMILY Homeodomain-like 15 85 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo225g00006 1 85 MYB Transcription Factor Family AT2G31180 68.235 2.64e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo225g00006 Myb_DNA-binding 1.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo225g00006 K09422 - gmx:100777621 166.007