Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo21g00003 ATGGTACTAGGTGAACACAAGGGTACAAGAGAGGCAAGGCTACCCACGAAAATCCTTTGGATGAGGAGAATGTGTGTGCTCAGACGCTTGCTTTGCAAGTACAGGGAATCTAAGAAGATTGATAATCACATGTACCATGACATGTACATGAAGGTTAAGGGTAATGTTTTCGAGAACAAGAGGGTTTTAATGGAGAGCATACTCAAGTCTAAAGCACCCACATAG 225 0.4267 MVLGEHKGTREARLPTKILWMRRMCVLRRLLCKYRESKKIDNHMYHDMYMKVKGNVFENKRVLMESILKSKAPT 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo21g00003 74 SUPERFAMILY Ribosomal protein L19 (L19e) 2 68 IPR035970 GO:0003735|GO:0005840|GO:0006412
Pumo21g00003 74 Gene3D - 1 74 - -
Pumo21g00003 74 PANTHER 60S RIBOSOMAL PROTEIN L19 3 72 IPR039547 GO:0003723|GO:0003735|GO:0022625
Pumo21g00003 74 SMART Ribosomal_L19e_2 1 71 IPR000196 GO:0003735|GO:0005840|GO:0006412
Pumo21g00003 74 Pfam Ribosomal protein L19e 4 70 IPR000196 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo21g00003 4 72 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 86.957 9.02e-38 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo21g00003 K02885 - jre:108988994 118.242