Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo219g00003 ATGGGTTCTTTCTTGTGCACTCGAGATGCTACTCAATGGAGAGATGTCTTGGATAGATTGAAGACAAATCCAAATGATAAAATTATGAATGTACTTCAAATAAGTGTTGATGGACTAGAATATGAGGAAAAAGAAATATTTTTACACATTGCATGTTTCTTTAAAGGGGAGAGGGAAGATTATGTTAAACGAGTTCTAGAATGTTGTGGATTGCACCCTCATATTGGTATTCAAAGAATCATTGAGAAATCCTTGATTACGGTTAGAGATCAAGAAATTCATATGCATATGTTTCAAGAATTGGGAAAGAAAATTGTTCGTGAACAATTTCCTGAAGAGCCAAGATTATGGAGTAGATTATGGCTTTATGAAGATTTCTATCAGGTCTTAATGACGAAAATGGGAACAGATAGTGTTAAAGCCGTAGTTCTGGATCCAAAAGAAGATGTCTTCAAATGTAAGGTTGATGGATTGTCAAAAATGAGGAATCTTAAATTACTCATATTATACCATCAAAAATTTTCAGGAAGCCTCAATTCTCTTTCCAACAAGCTGCGATATCTTTTGTGGCATGGTTATCCTTTTGCTTCTTTACCATTAAATTTTAAGGCCGTTAATCTTGTGGAATTAAATATGCCTAATAATAGCATCAAACGAGTTTGGGAAGGCCTCAAGAATTTTCCCTGTTTGAAAAGGATGGATTTGAGCAACTCCAAACATCTTACAGAGACTCCAGATTTTTCAGGGATCCCAAAACTTGAGCGGCTTGATCTTTCAGGATGCACAAATTTATTACATGTCCACCCATCAATTGGACTTCTTGAAAAACTTGCTTTCTTGAGTTTTCGAAATTGTAGCAATCTAGTCAACATCAACTTTGGTTGGGGATCTAATCTAAGTTCTCTGAGAGTTGTACATTTCTTTGGTTGCACTAAACTTGAAAACACACCAGATTTTACAAGTGCAACGAATCTTAAGTACCTTGACTTTGATGGATGTACAAGTTTATCCTTGGTTCATGAATCTATTGGAGCTCTTTTAAAACTCACATTCTTGAGTTCGAGAGACTGCAAAAATCTTGTTAGTATACCTAACAACATTAATTCCATGATATCTCTTCAAACTCTAGATTTATGTGGCTGTTTGAAACTTACAAATTTGCCCCTAGGACAAGCTTTCAATTCTTTGTCGTTGGTATCTTTGATATTTTTGGACATAGGCTTTTGCAATCTACTTGAAGTACCTGATGCTATTAGAGTGTTAGGGTGTTTAGAAAGACTGAATCTACAGGGAAACAATTTTGCTTCAATACCTTCCGTCAGTTCGCTACATCATCTATCATATTTGAACTTGTCTCATTGCCATAATCTTGGAACTTTTCCTGACATTCCATCAGGTACGGATTCATCAGGGGGAAGGTATTTTAAAATGGTATCTGGATCTCGTGATCATAGGTCAGGGTTATATGTTTTTGATTGTCCCAAGGAGCCCTATCATTTTCGATGTGGCTTTGACATTGTTGTTCCTTGGTGTTGGAGTAATATTCCACGGTGGTTCTATTCAGAATTTGACAGGGGTTCATTTGCAAGGATAAAGAACTTTAATATGGATGACAACTGGATTGGCTTTGCCTTTTGTGTTGTATTTCAGGTAAAAAGTCATCCATATTGTTCATCTTCTTCGTCATCGCCACATCCATTTTATCTTTCTTTTGAAAGTGAACACACAGAAGAATACTTTGATATGTCACTTAATTTGGAGCTGAACAAGATTGATGGAGCAAAACATCTTTGGATCATTTATATCTCTCGGCAACACTGTCATTTTGTGAAAACAGGGGCTCATATCTCATTTAAAGCCCACCCAAGTATTAAAATCATTAAATGGGGGATGAACAGTATATCGAAGCAAGATGTATATGATGACTTTGATATTTCGATGCAAGAAGAAGTATCCCTTCAACTCGATCCTAGTGATGTACTACACTCTATTGACTTTGATTGTGTAGAAGACGAAGAGGAAGGCACAAATGAAGACAAAGATGAGAATATTGAATGGAACAGTAGCTCTGGGTGTAAAATCCAGCTTCCTTACAATTGGTTGGTCACTGAGGAAGACCAAGTTGAGAATATTGAAGCAAAGACGAAAGAAAATAATCTCTCCAGTGTGGGGCTTTAA 2178 0.3627 MGSFLCTRDATQWRDVLDRLKTNPNDKIMNVLQISVDGLEYEEKEIFLHIACFFKGEREDYVKRVLECCGLHPHIGIQRIIEKSLITVRDQEIHMHMFQELGKKIVREQFPEEPRLWSRLWLYEDFYQVLMTKMGTDSVKAVVLDPKEDVFKCKVDGLSKMRNLKLLILYHQKFSGSLNSLSNKLRYLLWHGYPFASLPLNFKAVNLVELNMPNNSIKRVWEGLKNFPCLKRMDLSNSKHLTETPDFSGIPKLERLDLSGCTNLLHVHPSIGLLEKLAFLSFRNCSNLVNINFGWGSNLSSLRVVHFFGCTKLENTPDFTSATNLKYLDFDGCTSLSLVHESIGALLKLTFLSSRDCKNLVSIPNNINSMISLQTLDLCGCLKLTNLPLGQAFNSLSLVSLIFLDIGFCNLLEVPDAIRVLGCLERLNLQGNNFASIPSVSSLHHLSYLNLSHCHNLGTFPDIPSGTDSSGGRYFKMVSGSRDHRSGLYVFDCPKEPYHFRCGFDIVVPWCWSNIPRWFYSEFDRGSFARIKNFNMDDNWIGFAFCVVFQVKSHPYCSSSSSSPHPFYLSFESEHTEEYFDMSLNLELNKIDGAKHLWIIYISRQHCHFVKTGAHISFKAHPSIKIIKWGMNSISKQDVYDDFDISMQEEVSLQLDPSDVLHSIDFDCVEDEEEGTNEDKDENIEWNSSSGCKIQLPYNWLVTEEDQVENIEAKTKENNLSSVGL 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo219g00003 725 Pfam Leucine Rich Repeat 206 223 IPR011713 -
Pumo219g00003 725 SUPERFAMILY "Winged helix" DNA-binding domain 26 130 IPR036390 -
Pumo219g00003 725 Gene3D Ribonuclease Inhibitor 301 394 IPR032675 -
Pumo219g00003 725 Gene3D Ribonuclease Inhibitor 395 485 IPR032675 -
Pumo219g00003 725 ProSiteProfiles Leucine-rich repeat profile. 423 444 IPR001611 GO:0005515
Pumo219g00003 725 SUPERFAMILY L domain-like 158 467 - -
Pumo219g00003 725 Gene3D Ribonuclease Inhibitor 130 300 IPR032675 -
Pumo219g00003 725 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 298 463 IPR044974 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo219g00003 297 462 WRKY Transcription Factor Family AT4G12020 36.310 2.71e-15 78.6