Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo214g00013 ATGTCTATTCTAACATTTGGTCCTTGTAAGCTGAGTGCTACCCTAGCTCTTAGGAGGATGGGGTTGATTACGAAACTTCAATATTCTGTTGCTGATAGGACATTGTCTTCTGGTTCCGTGGATTCGCCAGCGTCCAAAATGGACTCCGGTCGAATGACTCGGAGGCGGGGAGGCTCCTCGTCGATATATAGCCGTCCTAGTTTATCAGAAATGAAGAAGGAGAAGGCGGCAATAAGGGAAAAGGTTTATGAGTTCTTGAGGGCAATTGGCATTGTTCCTGATGAGCTCGATGGTCTTGAACTTCCTGTGACTGTTGATGTTATGAGGGAGCGCGTAGATTTTCTTCATAGTTTGGGGCTTACGATTGAAGACATTAACAACTATCCACTTGTTCTTGGGTGTAGTGTCAAGAAGAACATGATTCCTGTGCTTGATTACCTTGGAAAATTGGGAGTGAGGAAATCCACGATTACGCAGTTCTTGCAGAGGTACCCACAAGTGCTCCATGCTAGTGTGGTTGTGGATCTTATGCCGGTGGTCAATTATCTTAAGGGGATGGATATCAAGTTTGATGATATTCCTCGTGTTCTTGAGAGGTACCCTGAATTGCTTGGATTCAAACTTGAGGGAACCATGAGCACATCAGTTGCTTATTTGATTGGAATTGGAGTAGGAAGAAGAGAAATTGGAGGTGTCTTAACTAGATACCCAGAGATTTTGGGGATGCGAGTTGGTAGAATCATCAAGCCTTTTGTGGAGTATCTGGAAAGCTTGGGAATTCCAAGGTTAGCCATTGCTAGATTGATAGAGCAACGACCTTATATTCTTGGATTTGGGCTGGATGAGAAGGTGAAGCCAAATGTTAAATCCCTTGAAGAGTTTAATGTTAGGCGAACATCACTTTCGTCTATAATTGCTCAATATCCTGACATCATTGGAACTGACTTAAATCCAAAGCTTGTCAAACAGAGAAGTTTACTCAATTCTGTACTTGATTTGGATCCAGAGGACTTTGGCCGAGTTGTTGAGAAGATGCCACAGGTAGTTAACCTCAGCAGTGGACCTATGCTGAAGCATGTTGATTTTCTTAAGGATTGTGGGTTTTCCTTGCCACAATTGAGGAAGATGATTGTTGGATGCCCTCAATTACTTGCTTTAAACATTGACATTATGAAACTTAGCTTTGATTACTTCCAAATGGAGATGAAAAGGCCTTTGGAAGACTTGGTTACTTTCCCTGCATTCTTCACTTACGGTTTGGAGTCAACTATAAAACCTAGGCATAAGATGGTTGTCAAGAAAGGGTTGAAGTGTTCTCTGTCATGGATGCTTAATTGCTCTAATGAGAAATTTGAGCAACGAATGGACTATGACACTATTGACATGGAAGAGATGGAAACGGAACCATCATTTGACATGAATTCACTGACGCAACCAAGAAGTGATGAATCAGATTTTGATTATGAAGACAGTGATGAAGATGATGAGTAG 1491 0.4185 MSILTFGPCKLSATLALRRMGLITKLQYSVADRTLSSGSVDSPASKMDSGRMTRRRGGSSSIYSRPSLSEMKKEKAAIREKVYEFLRAIGIVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGVRKSTITQFLQRYPQVLHASVVVDLMPVVNYLKGMDIKFDDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRREIGGVLTRYPEILGMRVGRIIKPFVEYLESLGIPRLAIARLIEQRPYILGFGLDEKVKPNVKSLEEFNVRRTSLSSIIAQYPDIIGTDLNPKLVKQRSLLNSVLDLDPEDFGRVVEKMPQVVNLSSGPMLKHVDFLKDCGFSLPQLRKMIVGCPQLLALNIDIMKLSFDYFQMEMKRPLEDLVTFPAFFTYGLESTIKPRHKMVVKKGLKCSLSWMLNCSNEKFEQRMDYDTIDMEEMETEPSFDMNSLTQPRSDESDFDYEDSDEDDE 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo214g00013 496 MobiDBLite consensus disorder prediction 35 67 - -
Pumo214g00013 496 Pfam mTERF 144 452 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 Gene3D Transcription termination factor 3, mitochondrial 113 248 IPR038538 -
Pumo214g00013 496 Gene3D Transcription termination factor 3, mitochondrial 249 461 IPR038538 -
Pumo214g00013 496 FunFam Transcription termination factor MTERF4, chloroplastic 246 460 - -
Pumo214g00013 496 MobiDBLite consensus disorder prediction 467 496 - -
Pumo214g00013 496 SMART mt_12 406 437 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 158 189 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 122 153 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 59 92 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 302 334 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 339 369 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 374 405 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 230 261 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 SMART mt_12 194 225 IPR003690 GO:0003690|GO:0006355
Pumo214g00013 496 FunFam Transcription termination factor mterf4, chloroplastic 108 245 - -
Pumo214g00013 496 PANTHER CGI-12 PROTEIN-RELATED 143 454 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo214g00013 mTERF 2.2e-107 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo214g00013 K15032 - gmx:100785223 863.218