Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo214g00005 ATGGGAGAGGGAGAGAACACAGAAACAGAATCAACAGAATCAGAAGCAACATCGACATGGAACCTCGGAAAACACACTCAGATAATCGAACTTTCGGAGAAGCTGACGAACGGGAATCTCGGCGCCAAGATTGAGGCCGCGAGGGAGATAAGGAAGATGGTTCGGAAATCGTCGTCGTCGTCGAAGACGCGTGCGAAGCTCGCCGCAGCGGGTGTGATTGAACCGCTCGTGTTGATGCTCTCTTCTTCCAACATGGATGCTCGCCAATCCTCTCTCCTCGCTCTCCTCAACCTCGCTGTTCGCAACGAACGAAACAAGGTCAAAATAGTGACAGATGGTGCAATGCCTCCACTGGTGGAGCTCCTCAAGATGCAAAATAGCGGTATACGAGAATTAGCTACAGCTGCAATCTTGACACTCTCAGCTGCTGCATCCAACAAGCCCATTATTGCTGCTTCTGGAGCCGCACCTCTCCTTGTTCAGATTCTCAAATCTGGAAGTGTACAAGGCAAAGTTGATGCTGTTACAGCCCTCCACAATCTTTCTACTAGCATCGAGAATTCCATTGAACTTCTTGATGCAAGTGCTGTTTTCCCTCTGATCAACCTCCTTAAAGAGTGCAAGAAGTATTCCAAGTTTGCAGAAAAAGCCACAGCACTGCTTGAAATCCTTTCCAACTCCGAAGAAGGACGAACGGCAATCTCAATTGCAGATGGTGGAATCTTAACGCTAGTAGAGACAGTTGAAGATGGATCACTTGTCAGCACAGAACATGCTGTTGGAACCCTGCTATCATTATGTCGAAGCTGCCGAGATAAATACCGGGAACTGATTCTCAAAGAAGGAGCGATTCCAGGTCTGTTACGTCTGACAGTGGAGGGCACAGCTGAAGCTCAAGATAGAGCACGTGTGCTTCTGGATTTGCTCAGAGATTCTCCCCCAGAAAAAAGACTAACCTCATCAGTTTTGGAGAAAATTGTTTATGACATTGCTGAACGTGTAGATGGAGCAGATAAAGCTGCTGAAACTGCCAAACGGTTATTGCAAGATATGGTTCAAAGAAGTATGGAACACAGCATGAAATGCATCCAGCATAGGGCTGCATCTTGTACTCCTTCTATTCCATCCACTTGA 1134 0.4709 MGEGENTETESTESEATSTWNLGKHTQIIELSEKLTNGNLGAKIEAAREIRKMVRKSSSSSKTRAKLAAAGVIEPLVLMLSSSNMDARQSSLLALLNLAVRNERNKVKIVTDGAMPPLVELLKMQNSGIRELATAAILTLSAAASNKPIIAASGAAPLLVQILKSGSVQGKVDAVTALHNLSTSIENSIELLDASAVFPLINLLKECKKYSKFAEKATALLEILSNSEEGRTAISIADGGILTLVETVEDGSLVSTEHAVGTLLSLCRSCRDKYRELILKEGAIPGLLRLTVEGTAEAQDRARVLLDLLRDSPPEKRLTSSVLEKIVYDIAERVDGADKAAETAKRLLQDMVQRSMEHSMKCIQHRAASCTPSIPST 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo214g00005 377 Gene3D - 14 371 IPR011989 -
Pumo214g00005 377 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 113 155 IPR000225 GO:0005515
Pumo214g00005 377 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 71 113 IPR000225 GO:0005515
Pumo214g00005 377 PANTHER U BOX DOMAIN-CONTAINING 27 311 - -
Pumo214g00005 377 SUPERFAMILY ARM repeat 31 325 IPR016024 -
Pumo214g00005 377 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 195 239 IPR000225 GO:0005515
Pumo214g00005 377 Pfam Armadillo/beta-catenin-like repeat 102 141 IPR000225 GO:0005515
Pumo214g00005 377 Pfam Armadillo/beta-catenin-like repeat 146 182 IPR000225 GO:0005515
Pumo214g00005 377 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 154 196 IPR000225 GO:0005515
Pumo214g00005 377 SMART arm_5 101 142 IPR000225 GO:0005515
Pumo214g00005 377 SMART arm_5 227 268 IPR000225 GO:0005515
Pumo214g00005 377 SMART arm_5 184 226 IPR000225 GO:0005515
Pumo214g00005 377 SMART arm_5 143 183 IPR000225 GO:0005515
Pumo214g00005 377 SMART arm_5 60 100 IPR000225 GO:0005515
Pumo214g00005 377 FunFam U-box domain-containing protein 4 5 369 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo214g00005 26 311 U-box Gene Family AT3G54790 38.328 1.54e-38 144