Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo214g00002 ATGGGCCTCTCAAGTCTCCCAGCACCATCTGAAGGAGTATTATGTGTCCTTCTGGTGAACACTGTATTGTCAATTTCCATATTTAAAGGCATTGTTAGGACAATCCTACACATTGTTGGTATCCATCTTTCATCATCATCCACTTCACCCTCTTCGCCGGATCCGTCCCAAGCCCAACCTGACTCACTTGAATTCCATCTTAGTCCCTCTGAGAGTTACATTGAAGAGTTCAGAAGCCGGACACCGACACTCAGGTTCGACAGTGTGTGCTGCTGTAAACAACCTGAACATGACTGCTCTGTATGTCTCACTCAGTTTGAACCCGAATCGGAGATAAACTGCTTATCGTGCGGCCATCTCTTCCATAAAGTGTGCTTGGAGAAGTGGCTGGACTACTGGAACATTACATGCCCACTTTGCAGGACCCCCTTGATGCCTGAAGATGACACACCTTGCTTTCAGTAA 465 0.4688 MGLSSLPAPSEGVLCVLLVNTVLSISIFKGIVRTILHIVGIHLSSSSTSPSSPDPSQAQPDSLEFHLSPSESYIEEFRSRTPTLRFDSVCCCKQPEHDCSVCLTQFEPESEINCLSCGHLFHKVCLEKWLDYWNITCPLCRTPLMPEDDTPCFQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo214g00002 154 SUPERFAMILY RING/U-box 98 147 - -
Pumo214g00002 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 149 IPR013083 -
Pumo214g00002 154 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Pumo214g00002 154 Pfam Ring finger domain 98 141 IPR001841 -
Pumo214g00002 154 SMART ring_2 99 140 IPR001841 -
Pumo214g00002 154 ProSitePatterns Zinc finger PHD-type signature. 90 140 IPR019786 -
Pumo214g00002 154 PANTHER - 1 148 IPR044249 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo214g00002 1 148 C3H Transcription Factor Family AT2G04240 66.234 2.28e-59 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo214g00002 K16285 - gmx:100786803 294.664