Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo214g00001 ATGTATGCCCAAGTTGTACTGTCCTGGAAGAAAGTTTCTGGAATATGTGAAGATGATGATCTATATGATGATTTCATTATGGATGAAGTGGATCTAGAACTTGAGAACTATGAGGAACTTTTTGGGATGGCTCTCAGTCACTCTGAAGAGCTTTTTGAAAATGGTGGAATTGATAGCTTATTTGAGACAAAGGACATGTCTGCTAGTGCTGGTGATTCCCAATGTCAGGGTGCTGTTGCTGCTGAGGGATCCTCTGCTGGGTTGGTCAATGCTATCCAACCAGCATGCAGCAATGCAGCATCTGCAGATTCAATGTTGAGTACAAAAACTGAACCAATTGTTTGTTTTACGGCAAGGCAATCTCAATCGAACATTTCTTTTTCTGCTGTTACCAAAGATAGTGCTGGTGACTATCAAGACTGTGGTGCTTCTTCAATGCTTCTCATGGGAGAGCCTCCTTGGTGTCCTCCTTGCCCTGAGAGTTCTCTGCATTCTGCTAACCGCAGCAATGCTGTCATGCGCTATAAGGAAAAGAAGAAGACCCGGATGTTTGAGAAGAAAGTAAGGTATGCCTCTCGCAAGGCTAGGGCTGATGTCAGAAGGCGCGTGAAGGGCCGATTTGTGAAAGCCGGTGATGTCTATGACTATGACCCTTTGAACCAAACCAGAAGCTGCTGA 678 0.4484 MYAQVVLSWKKVSGICEDDDLYDDFIMDEVDLELENYEELFGMALSHSEELFENGGIDSLFETKDMSASAGDSQCQGAVAAEGSSAGLVNAIQPACSNAASADSMLSTKTEPIVCFTARQSQSNISFSAVTKDSAGDYQDCGASSMLLMGEPPWCPPCPESSLHSANRSNAVMRYKEKKKTRMFEKKVRYASRKARADVRRRVKGRFVKAGDVYDYDPLNQTRSC 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo214g00001 225 Pfam CCT motif 168 210 IPR010402 GO:0005515
Pumo214g00001 225 ProSiteProfiles CCT domain profile. 168 210 IPR010402 GO:0005515
Pumo214g00001 225 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 16 212 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo214g00001 14 224 C2C2-CO-like Transcription Factor Family AT3G07650 58.333 2.06e-77 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pumo214g00001 CCT 2.3e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo214g00001 - - gmx:100787695 385.571