Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo20g00013 ATGGTGGAGAAGGCAAAGAGTAGGAAGGAGGAGGTGGTTACTTGGGAGTACACCATTAACCTCCACTACACATTTAAGAAGAAAGCTCCCAATGCTATTAAGGAAATCAGAAAGTTTGCCCAGAAGGCCATGGGAACCAATGATGTGAGGGTGGATGTGAAGTTGAATAAATTTGTTTGGAGCCAGGGAATCAGGAGTGTTCCAAGGAGGATTAGGGTAAGAATTGCTCGCAAGAGGAATGATGATGAAGAAGCCAAGGAAGAGCTATACTCTCTTGTAACGATTGTTGAGACCCCTAAGGAGGAGCTCAAAGGGTTGGGCACCAAGGTTATTGATGACGAGGATTGA 348 0.4511 MVEKAKSRKEEVVTWEYTINLHYTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKLNKFVWSQGIRSVPRRIRVRIARKRNDDEEAKEELYSLVTIVETPKEELKGLGTKVIDDED 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo20g00013 115 ProSitePatterns Ribosomal protein L31e signature. 49 63 IPR020052 GO:0003735|GO:0005840|GO:0006412
Pumo20g00013 115 PANTHER 60S RIBOSOMAL PROTEIN L31 2 114 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo20g00013 115 FunFam 60S ribosomal protein L31 6 114 - -
Pumo20g00013 115 SMART Ribosomal_L31e_2 10 88 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo20g00013 115 Gene3D - 1 114 IPR023621 -
Pumo20g00013 115 Pfam Ribosomal protein L31e 11 87 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo20g00013 115 CDD Ribosomal_L31e 9 87 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo20g00013 115 SUPERFAMILY Ribosomal protein L31e 11 87 IPR023621 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo20g00013 2 115 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 74.790 1.26e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo20g00013 K02910 - gmx:100810835 191.815