Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo20g00012 ATGGTGGAGAAGGCAAAGAGTAGGAAGGAGGAGGTGGTTACCTGGGACACATTTAAGAAGAAAGCTCCCAATGCTATTAAGGAAATCAGAAAGTTTGCCCAGAAGGCCATGGGAACCAATGATGTGAGGGTGGATGTGAAGTTGAATAAATTTGTTTGGAGCCAGGGAATCAGGAGTGTTCCAAGGAGGATTAGGGTAAGAATTGCTCGCAAGAGGAATGATGATGAAGAAGCCAAGGAAGAGCTATACTCTCTTGTAACGATTGTTGAGACCCCTAAGGAGGAGCTCAAAGGGTTGGGCACCAAGGTTATTGATGACGAGGATTGA 327 0.4557 MVEKAKSRKEEVVTWDTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKLNKFVWSQGIRSVPRRIRVRIARKRNDDEEAKEELYSLVTIVETPKEELKGLGTKVIDDED 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo20g00012 108 Pfam Ribosomal protein L31e 13 80 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo20g00012 108 Gene3D - 6 108 IPR023621 -
Pumo20g00012 108 ProSitePatterns Ribosomal protein L31e signature. 42 56 IPR020052 GO:0003735|GO:0005840|GO:0006412
Pumo20g00012 108 CDD Ribosomal_L31e 13 80 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo20g00012 108 FunFam Os08g0505300 protein 37 108 - -
Pumo20g00012 108 SUPERFAMILY Ribosomal protein L31e 13 80 IPR023621 -
Pumo20g00012 108 PANTHER 60S RIBOSOMAL PROTEIN L31 13 107 IPR000054 GO:0003735|GO:0005840|GO:0006412
Pumo20g00012 108 SMART Ribosomal_L31e_2 10 81 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo20g00012 2 108 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 68.908 3.68e-51 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo20g00012 K02910 - gmx:100305583 175.637