Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo20g00006 ATGTGTGCACCCTTCAACATTCTTCTCTTGTTATCACTTTTGCTCACTTGTTCTTGTTGGTTTTGTTCTTGTTCCTTTTCACACCCTCGCCGTGTTCTCCACCAACCTCTTTTTCCCAGAATCTCTGTTCCACCAACACAACCTCCAACTCCAAGTTTTTTAGCTCCTAAACCTCAACCCAAACAGCACCAGCAACCGAAGCTTCCATTCTCTTCTATTTCATCTTCATCACCACCGCCGCCGCAGAAACCTTTCTTCCCTTCCTACCGTTCCCCGCCGCTCCCTCCTTCCCCCGCCGTCGTCGCCACCTTCCCCGCCAACATCTCCTCCCTCCTCCTCCCGCGCCCCATATCCCGCCACCACCGCTCCGCCGCCGCCCTCGCCGTCTCCCTCTCGCTCTTCTCCCTCGCCCTCCTCGCCGCCGCCGCCGCCTTCCTCCTCCACCGCCGCCGCACGCACTCCTCCTCGTCCCCCTCCGCCGCCGATGACGACGACAAGGCCTCGAGATCGGACAGCCTCCGCCTGTTCCCGCCGAACACCGCCACCTCCGACGGCGCCGACCGCAAGCCCCGCGGCAAGTCGAGTCCCACATCCGAGCTTCTCTACCTCGGCACGGTGGCGAACTCAGTCACCACCACCACCACCACAACAACAACAACCACCACAGACTCAAGCTCCAGCCACAACGACGGTTTCCGGCCACCGTACCAGAAACTCGGCGACTCGCCGGAGCTCAACCCGCTGCCGCCACTGCCACGTCACAAATTCAAACCATGGGTGAACGAAGAAGAAGAAGACTATGGTAATAAAGAGATAAAAGAAAAAGCGAAACAACAAGAAGAAAATGAATCGCAAGAGGAAGAGGAAGAAGAGGAACAGTTTTTTTCTCCTAGAGGTTCTTCTAGTGGAAACATTAACAATAATAAACAACAACAGAGTCCTCCTTCTCCATCTGCTCTTGCCACCGCTGCTTCAAGCTCACGCGTTTTCCACGTGGATAAATTCGGTTCCAGAAGCTTCACTTCTCGAACCCCTTCCTACCCTCGTTCCAATTCCCTCTCTTTCTCTCGTTCCCCTTCTCTGAATTTCAGCCCCGCAAGTGTTAAATCACTGCCTCCGAACAACCCTGCTTCCCCTTCTTTCTCTTCATCCTCTTCTTCTCCGATAGAAGAATGGCATGTTCCTTCTCAGGGGAAGAATTCTCCGGCGACCGTCACTTTACCTCCTCCTCCGCCGCCACCTCCGCCTCCACCGCCGCGGTTTTGGGAGACTCCGGTTGATGATAAAAGTGTTACTTTTAGGAACGAGAGCGAGGAGACTCCGAAGCCGAAGTTGAAAGCTTTGCATTGGGACAAAGTTAAGGCCAGCTCGGACAGGGTCATGGTTTGGGATCGGTTGAGACCAAGTTCTTTTCAGTTGAACGAGGACATGATTGAAACACTTTTTATGGTAAATAATAATTCAAAGGAGGGTTTCGGTGTTGCGATTAGAGATAATGCTCGGCGTCAAGTAGTTCATTCGGCTTCTCCCATGCCCCTGGAGAATAGGGTGCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGGGCGCTTAATGTGACTATTGATGAAGTTTGTGACGCCCTTAGGGAAGGCAATTGTGATGCATTGGGAACAGAACTTCTTGAAAGTTTATTAAAGATGGCTCCAACTAAAGATGAAGAATCTAAGCTGAAGGAGTTTCAAGATGAATCACCCTTCAAGCTTGGCCAGGCAGAGAAATTTCTTAAAGTCGTGCTTGATATACCTTTTGCTTTTAAGAGGGTGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTTAAGAAATCCTTCGAAACTCTGGAGGTGGCCTGTGAGGAATTAAGGAATAGCAGAATGTTTTTGAAGATACTTGAAGCAGTGCTGAGAACAGGAAATCGAATGAATGTTGGCACCAATCGCGGTGATGCTCACGCCTTCAAACTGGACACGCTTTTGAAGTTAGTTGATATTAAAGGAACTGATGGAAAGACTACTCTCTTGCATTTCGTTGTACAGGAAATTGTCAGAACTGAGGGTTCTCATATTTCTGGTTCTAATAATCACCATGGCTCTGACAATGGCCACCAATATACTCTTCAAGATGAGGTTGACTTCAAAAAGCTTGGCCTGCAAGTTGTCTCAGGCTTGAGTGGTGAGCTCACCAATGTTAAAAAAGCAGCTGCTATGGATTCAGACATGCTCAGTAGTGATGTTGCTAAACTTTCCAGAGGAATTGAAAAAGTTGTGCAAGTTGTAAAATTGAACGAGGAGTCACCTTTGAAAGAAACTAACCAAAAATTTTCTGAGGCAATGAAAGGTTTCTTGGGGAGGGGAGAGCAAGAGATTTCAACAATTCAGACTCGGGAGAAAAATGCCCTCTCTTCAGTAAAGGAGATAACTGAGTATTTCCATGGAAATTCAACCAAGGAAGAAGCTCATCCATTTAGAATTTTCATGGTTGTGAGGGACTTTCTTTCAATACTAGATGGTGTTTGCAAGGAAGTTGGTAAAGTAAATGAGAGGACTTTGGTTGGTTCCCGTCAATCTGTAATGCCTGCAAATCCTGTAATGCAAACCTTTTTCCCTGAGATTGTTGGTAAGCAACCATCTGATTCCTCTGAATCTGATTAA 2691 0.4809 MCAPFNILLLLSLLLTCSCWFCSCSFSHPRRVLHQPLFPRISVPPTQPPTPSFLAPKPQPKQHQQPKLPFSSISSSSPPPPQKPFFPSYRSPPLPPSPAVVATFPANISSLLLPRPISRHHRSAAALAVSLSLFSLALLAAAAAFLLHRRRTHSSSSPSAADDDDKASRSDSLRLFPPNTATSDGADRKPRGKSSPTSELLYLGTVANSVTTTTTTTTTTTTDSSSSHNDGFRPPYQKLGDSPELNPLPPLPRHKFKPWVNEEEEDYGNKEIKEKAKQQEENESQEEEEEEEQFFSPRGSSSGNINNNKQQQSPPSPSALATAASSSRVFHVDKFGSRSFTSRTPSYPRSNSLSFSRSPSLNFSPASVKSLPPNNPASPSFSSSSSSPIEEWHVPSQGKNSPATVTLPPPPPPPPPPPPRFWETPVDDKSVTFRNESEETPKPKLKALHWDKVKASSDRVMVWDRLRPSSFQLNEDMIETLFMVNNNSKEGFGVAIRDNARRQVVHSASPMPLENRVLDPKKSQNIAILLRALNVTIDEVCDALREGNCDALGTELLESLLKMAPTKDEESKLKEFQDESPFKLGQAEKFLKVVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACEELRNSRMFLKILEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGSNNHHGSDNGHQYTLQDEVDFKKLGLQVVSGLSGELTNVKKAAAMDSDMLSSDVAKLSRGIEKVVQVVKLNEESPLKETNQKFSEAMKGFLGRGEQEISTIQTREKNALSSVKEITEYFHGNSTKEEAHPFRIFMVVRDFLSILDGVCKEVGKVNERTLVGSRQSVMPANPVMQTFFPEIVGKQPSDSSESD 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo20g00006 896 MobiDBLite consensus disorder prediction 73 89 - -
Pumo20g00006 896 Pfam Formin Homology 2 Domain 437 848 IPR015425 -
Pumo20g00006 896 SMART it6_source 435 863 IPR015425 -
Pumo20g00006 896 MobiDBLite consensus disorder prediction 49 89 - -
Pumo20g00006 896 MobiDBLite consensus disorder prediction 404 423 - -
Pumo20g00006 896 MobiDBLite consensus disorder prediction 337 403 - -
Pumo20g00006 896 MobiDBLite consensus disorder prediction 198 232 - -
Pumo20g00006 896 Gene3D Formin, FH2 domain 441 873 IPR042201 -
Pumo20g00006 896 PANTHER FORMIN-RELATED 9 887 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo20g00006 896 MobiDBLite consensus disorder prediction 256 282 - -
Pumo20g00006 896 Coils Coil 268 293 - -
Pumo20g00006 896 MobiDBLite consensus disorder prediction 151 426 - -
Pumo20g00006 896 MobiDBLite consensus disorder prediction 296 325 - -
Pumo20g00006 896 ProSiteProfiles Formin homology-2 (FH2) domain profile. 435 874 IPR015425 -
Pumo20g00006 896 SUPERFAMILY Formin homology 2 domain (FH2 domain) 409 861 - -
Pumo20g00006 896 MobiDBLite consensus disorder prediction 155 171 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo20g00006 392 888 FH2 protein (formin) Gene Family AT3G25500 62.035 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo20g00006 - - gmx:100786203 1296.95