Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo20g00002 ATGGAGAAGGAGAGCAGTGACAAGGAGGAGTGTGTGATGTTGCAAAGATGTGTGAAGAAGCTTCACTTTGGAAGCTGGGAAGAGAAAGAGGTGGCAGCAAAGGTGATTGAAGAAGGGTTGGCAAGAAAAGATGTGAAGGTTAGAGAGTTGGCAAGTGACCTTGGGGTGGTGAGAGTGTTGGTTTCTATGGCGGTTTCCGACGTGGCTAGCCGTCGCCGAGTAGGACTCATGGCCTTGATCCACCTATCCAATGGAACTCACAGGAACAAGGCTTTGATTGTGGAGGCAGGAATATTGTCCAAACTGCCTAAGAAAATTGACCTTGAAGATGAATCAATAAGTGAATTTGCACACTTACTCTCTTCATTGTCATCTCTAGGAAACATCCAATTTCCTCATTCTTCACCACACTTTCTCCAATTTCTTATAGACATTCTCAAGTCATGCTCAAGTTTTGATACCAAAGAATGGTGCTTGGTGGCCATCTGCAACATCTCAGCTGTGTTAGAGAATGCAGGGCCTTTGGTTTCAAATGGGGTTGTGCCTATTCTCTTGGAAATGTCCTCTATGAAAGGAGCTTCAGAGAAAGCACTTACCATCCTTGGGAACTTGGGGGTGACTTTAATGGGAAAGAAAGCAATAGAGAATAGCTCAATGGTGCCAAAATGCTTGGTTGAGATCTTATCTTGGGAAGACAAACCCAAATGCCAAGAGTTATCATCTTACATTTTGATTATTCTAGCTCATAAAAGCTCAACACAGAGAGAGAAAATGTTACAGTCAGGGATTGTCCCTGCACTTCTTGAAGTGGCTTTATTGGGGAGTTCTTTGGCTCAGAAGAGAGCACTGAAATTATTGCAATGGTTTAAGGAAGAGAGGCAAATAAAGATGGGACCACATTCAGGCCCACAAACTTCAAGAACTGATAAGGAATCACTTGTCAGGGACACAAAAGAAGGGAAGAGAATGATGAAGAATTTAGTGAAAGAAAGTTTGCATAGGAATATGGAAATAATAACTAAAAGAGCGAATGGAGATAGGGATTCTCCTAATAAACTGAAGCCCCTCGTTATCAGCACAAGTTCCAAAAGTTTGCCCTACTAA 1104 0.4239 MEKESSDKEECVMLQRCVKKLHFGSWEEKEVAAKVIEEGLARKDVKVRELASDLGVVRVLVSMAVSDVASRRRVGLMALIHLSNGTHRNKALIVEAGILSKLPKKIDLEDESISEFAHLLSSLSSLGNIQFPHSSPHFLQFLIDILKSCSSFDTKEWCLVAICNISAVLENAGPLVSNGVVPILLEMSSMKGASEKALTILGNLGVTLMGKKAIENSSMVPKCLVEILSWEDKPKCQELSSYILIILAHKSSTQREKMLQSGIVPALLEVALLGSSLAQKRALKLLQWFKEERQIKMGPHSGPQTSRTDKESLVRDTKEGKRMMKNLVKESLHRNMEIITKRANGDRDSPNKLKPLVISTSSKSLPY 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo20g00002 367 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 4 367 - -
Pumo20g00002 367 Gene3D - 4 133 IPR011989 -
Pumo20g00002 367 MobiDBLite consensus disorder prediction 340 367 - -
Pumo20g00002 367 MobiDBLite consensus disorder prediction 296 322 - -
Pumo20g00002 367 Gene3D - 134 298 IPR011989 -
Pumo20g00002 367 SUPERFAMILY ARM repeat 14 288 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo20g00002 55 301 U-box Gene Family AT1G67530 28.000 2.00e-16 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo20g00002 - - gmx:100816066 583.948