Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo208g00001 ATGGAGTGCTGGAAAGAAAAAAGCAAGTTTGTTTGGCCCATTTTTTATAATGTAAAACCATCTTATGTGTGCCATCAGAAAGGAAGTAATGCAAAAGCACTAGCCAAACATGAAACAAGAATCAGTGACAAGGACAAGGTGAATAAATGGAGGTCAGCTTTGCAAGAAGCTGCAAATATATTTGGTTCTCTTTTCAAACATAAGACTGAACATGAATTCATCCAGGAGATCACTGAAGATGTCTCTAAACTGATCAATCGTAGCCCTTTTTATGTTCCTAAACACTCAGTTGGCTTAGAGTCTCAAGTGCAGAAGGTAAAGTCACTACTTGATGTTGAGTCAAATGATGGAGCCCACATGGTAGGAATTTATGGAGTATGTGGAATTGGGAAGACAACACTTGCAAGTGCAGTATATAATTCCATTGCTAATCAATTTGAAGGTGTCTCTTTTCTTTCTAAGATTAATTAG 471 0.3715 MECWKEKSKFVWPIFYNVKPSYVCHQKGSNAKALAKHETRISDKDKVNKWRSALQEAANIFGSLFKHKTEHEFIQEITEDVSKLINRSPFYVPKHSVGLESQVQKVKSLLDVESNDGAHMVGIYGVCGIGKTTLASAVYNSIANQFEGVSFLSKIN 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo208g00001 156 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 66 IPR035897 -
Pumo208g00001 156 Pfam TIR domain 1 83 IPR000157 GO:0007165
Pumo208g00001 156 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 155 IPR044974 GO:0006952
Pumo208g00001 156 ProSiteProfiles TIR domain profile. 1 85 IPR000157 GO:0007165
Pumo208g00001 156 Gene3D - 86 156 IPR027417 -
Pumo208g00001 156 Gene3D - 1 85 IPR035897 -
Pumo208g00001 156 Pfam NB-ARC domain 100 150 IPR002182 GO:0043531
Pumo208g00001 156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 153 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo208g00001 7 155 WRKY Transcription Factor Family AT4G12020 32.000 5.40e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo208g00001 - - gmx:100814790 204.527