Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo207g00006 ATGGTACTCTCTAACACAAGGGTTGGCATTGTCACAAACTCATTGAGTGGTAGTATACCAGAAGAAGTGGGTAACCTTAAAAATCTCAATTCCCTAGATATGTCTGACAATCATCTGTCTGGTGACATTCCTGGAACCATCGGAGAATGCATAATGTTGGAGTACCTCTATTTGCAAGGAAATTCTTTACAAGGAAGCATACCATCCTCTTTGGCATCACTCAAGGGTCTTCAACGTTTAGACGTGTCACGAAACCGCTTGTCTGGATCAATTCCTAATGTTTTGCAGAACATTTCTTTCTTGGAATATTTCAACGTGTCTTTTAACATGTTGGATGGTGAGGTACCAATTGATGGTGTATTTCGAAATGCAAGTGGGTTAGTGGTGAATGGAAATAGTAAGCTTTGTGGAGGTATTTCAGAACTGCATCTACCACCATGCCCTGTCAAAGGTAAGAAGCTTGCAAAACACCACAAGTCCAGGTTGATAGCAGTGATAGCTAGTGTGGTTGCTTTTCTTCTCATATTATCAATTATTCTAACCATTTATTGGATGAGGAAAAGGAGTAAGAAACCATCTTTGGATTCCCCAACAATTGGCTTGCTGGCTAAAGTTTCATACCAAAGCCTGCACAACGGAACCGATGGGTTCTCATCTACAAACTTGATAGGGTTTGGAAATTTTAGCTCTGTTTACAAAGGAACTCTTGAGTTAGAAGACAAAGTTGTTGCCATAAAGGTCCTGAACCTTAACAAAAAAGGAGCTCACAAGAGTTTCATTGCTGAATGCAATGCACTGAAAGTATCAAACATCGAAATCTGCACAGATTACAAAGGTCAAGAATTTAAAGCTCTAATTTTTGAGTACATGAGAAATGGAAGCTTAGAGCAATGGCTGCACCCGAGGACACTAAGTGAAGAGCATCCGAGAACATTGAATCTTGATCAAAGATTAAATATCATGATTGATGTCACTTCTGCATTAAACTATCTTCATCATGAATGTGAGCAATCGATCATTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGATGACATGATTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTTCAGTCATTAACGGTACCACTTCTAAGCAAACAAGTACGATTGGAATAAAGGGGACTGTTGGCTATGCTCCTCCAGAGTATGGACTGGGTTATGAGGTGTCTATGGATGGTGACATGTATAGTTTTGGAATTCTTGTGTTGGCGATGCTACTGGACGAAGACCCACAAATGAAATATTTGAAGATGGTCACAATTTACATAACTTGTTGA 1311 0.3944 MVLSNTRVGIVTNSLSGSIPEEVGNLKNLNSLDMSDNHLSGDIPGTIGECIMLEYLYLQGNSLQGSIPSSLASLKGLQRLDVSRNRLSGSIPNVLQNISFLEYFNVSFNMLDGEVPIDGVFRNASGLVVNGNSKLCGGISELHLPPCPVKGKKLAKHHKSRLIAVIASVVAFLLILSIILTIYWMRKRSKKPSLDSPTIGLLAKVSYQSLHNGTDGFSSTNLIGFGNFSSVYKGTLELEDKVVAIKVLNLNKKGAHKSFIAECNALKVSNIEICTDYKGQEFKALIFEYMRNGSLEQWLHPRTLSEEHPRTLNLDQRLNIMIDVTSALNYLHHECEQSIIHCDLKPSNVLLDDDMIAHVSDFGIARLSVINGTTSKQTSTIGIKGTVGYAPPEYGLGYEVSMDGDMYSFGILVLAMLLDEDPQMKYLKMVTIYITC 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo207g00006 436 ProSitePatterns Protein kinases ATP-binding region signature. 223 246 IPR017441 GO:0005524
Pumo207g00006 436 Pfam Protein kinase domain 219 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo207g00006 436 Gene3D Ribonuclease Inhibitor 3 155 IPR032675 -
Pumo207g00006 436 PANTHER OS04G0122200 PROTEIN 10 418 - -
Pumo207g00006 436 Gene3D Transferase(Phosphotransferase) domain 1 290 433 - -
Pumo207g00006 436 SUPERFAMILY L domain-like 13 129 - -
Pumo207g00006 436 Pfam Leucine rich repeat 53 111 IPR001611 GO:0005515
Pumo207g00006 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Pumo207g00006 436 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 34 144 - -
Pumo207g00006 436 SMART serkin_6 217 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo207g00006 436 SUPERFAMILY Protein kinase-like (PK-like) 191 422 IPR011009 -
Pumo207g00006 436 ProSiteProfiles Protein kinase domain profile. 217 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo207g00006 436 Gene3D Phosphorylase Kinase; domain 1 202 289 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo207g00006 7 422 Receptor kinase-like Gene Family AT3G47570 48.284 2.82e-133 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pumo207g00006 Pkinase 8.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo207g00006 - - gmx:100782685 663.685