Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02206 ATGAATAATACACTACTCCCAAGGACCAGGCAGCCTCACACCAATGCCAGCATCTATACCAAAACAGTTACCTTACGGCAAGATCGCAGAATCCCACCTAATACTCTTAGAGAGATATCTATTCTGAATCGTTTTAAAGGTCATCCTAATGTTATCTCCTTACTCCGCCAGAGGCAAATTAACGATCGCCGGTTAGAATTACAGTTTGAGTATCTAAGAACAACTCTGTCAAGATATATTTCAGATGGTCGGTATTTGGTTGATGAATCTATAATAAGGAGCTTCATGTTTCAGCTAGTCTCACTTGTGGCGTATTGTCACTCAACTGGAGTTTTAATACTCAAGTTAGGTTCACCTATTGTACTAGTTGACAACAACCGGCCATTGATTAAGGTGGCAGACTTCTCTATGGCCAGACAATTTAAACCTGGTGAACACTTTGTTGTCAATAATCCGCCGGTAATGCAGCTAAGAGACCAAATGTCTGCAGAAGCTGAATATCTACTGCCACTGATCAACAATTCGGGGGCACGGTATCCTGCTTCTCCCATCTGGCAAACACAATAA 567 0.418 MNNTLLPRTRQPHTNASIYTKTVTLRQDRRIPPNTLREISILNRFKGHPNVISLLRQRQINDRRLELQFEYLRTTLSRYISDGRYLVDESIIRSFMFQLVSLVAYCHSTGVLILKLGSPIVLVDNNRPLIKVADFSMARQFKPGEHFVVNNPPVMQLRDQMSAEAEYLLPLINNSGARYPASPIWQTQ 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02206 188 Pfam Protein kinase domain 13 146 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02206 188 Gene3D Phosphorylase Kinase; domain 1 8 73 - -
Pumo1g02206 188 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02206 188 PANTHER CELL DIVISION PROTEIN KINASE 13 150 - -
Pumo1g02206 188 SUPERFAMILY Protein kinase-like (PK-like) 13 147 IPR011009 -
Pumo1g02206 188 Gene3D Transferase(Phosphotransferase) domain 1 74 186 - -
Pumo1g02206 188 SMART serkin_6 8 186 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02206 Pumo-Chr1 51604223 51604871 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02206 8 141 Core Cell Cycle Gene Families AT1G20930 33.803 3.86e-17 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pumo1g02206 Pkinase 3.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02206 K07760 K02206 gmx:100799974 92.4337