Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02203 ATGTCCTGCCACCTAGGCTTTAATGGATTAAGCATAGTGCAAGATTGCAACTGGAAATCTGGAATGGAATATAAGAGCCTTGAAACCTCGGGCCGGCTTAGTAACTTCTTTTATCAACAAATGGGGTACAGAATCACCGTGGATAAGCAGTTGCTTGGGGTAAACCAGAGGATCATCGAGAAAGAACTTGCAAATAAGAAAGAAGAGTACCTGATTGATGAGGGGCTTGCTCAGATTGTTAAACACTATGAATTAAATAAGGTTGCATTTAAGATAAAGTTGTTTCCAGGATCTTCACCAAAAGGTGTGGCTTTAGAACAGGCCATAAACCTAAAGGCAACATGGGTGATACTAGACAGGCAAATGAAGAAAGATGAGGAGTTTTTCCTGAAGAAGCTTTCTTGTGGCATATCTATATTAAGGCGTAACAATCGGATTGTTCATCTAAGAGGACCTATAGATCTCCCAGATGTAATACAATGTAACAGCCATGAAACATATGAAAGTTTACCAAGTTCTAGATCTTCTCGAAAACCTAATATTACAACTAATAATCTAATGATAGGCACACTTGAAGTTGATGAATTGAACCAGATACAAAGCAGGCCTTTTAAGGAAGAGGGGTGCTCAAATATTACTACCAATATTAATGAAAAAACATGTCAGACAATGGATGGAGCAGAAATAAATAGTAACCAAATGATAGATAAAATAGAAAGAGATGAGCAAGGCCATGATCAAGAACAGATGCAAAGCTTGCCCCATGAGATGGAGGGGGACACAACAATTGTGATTAAAAGTGATCAAACAACTGCTCGAGAAATAGAGAAAAGTATCTTGGAAAATTCAATGAACACTTTCTGCTCTGTCTGCAAAACTAGACGACCTAATATCGGGCGGCAAAAGGAATTTACTTATGAAGAACTCCATGCAGCCACAGATGCATTTTCATTGACAAACTGTCTCTCTGAAAGTGGATCTCTATTCACATTCAGAGGCCAGCTGGAAGGAGGAATGAAACTAGTGGTTAAGCAGCATGATGTAACAAACACTAAAGTAAGGGAAAAAGTGAAGTCAGAAATCCAAACCATCCTCAAAGCTAGACATAAGAATGTGATCATGCTATTGGGGTCATCTACAGCAGAATGTTTCCTGTATACTGTGTATGAGTATGCATGCAATGGTTCACTTGACAAGTATATATCAAAAGACAGCTCCAGACCATTGACCTGGATAGAAAGGAAAAGAGTGGCAATAGGCCTTGCCAGAGGTCTTAAGTACCTACATGACAATAGCATTGTTCATTGCAATATAAAACCAAGCAATATTCTTCTAACACACGACTTCAAACCGCTGATTGGCGATTTCGGCTTTGGGAAAGAACTTGAATTGAAGTCCTACAAAAATAAAAACAAAGGGAATTATGAATACATAGCACCAGAATACCAGGAGAAGGGGAAATTATCAACCAAGACAGATGTATACTCATTTGGTGTGGTTATTTTAGAGCTGATCACTGGGCGAAGGACTACAGATTTAATGTCAGAAGATAAAAGCCTCATCGAATGGGCAAAGCCACTTCTTAAAAGAAAGAAGTACTCAGAGTTGGTGGATCCCAAAATCAGAAACTCATATGAAGAGGACCACCTTCGTTGGCTGGTCCAAGTAACAACACAATGTCTAAAAAAGAATCCTAAGGAAAGATTATCAATGAATATGGCTGTTTCTGCATTACAAGGCATAGCAGACAGTGAACTCTGCCACATGACAGAAGATATTACTCCAGCTATATCAGATTCAAGAATTGTGCCAGACATAAATGGTTCACAAGGTCCAACAACAACAAAAGCTGATCAGCCAAGTCAGGAAGAGGAGCAAATCGAGAGCAGATTCTATGGGGAGGAAAAGAAGTTAACACTAAAAGTTGAGAAAAATCACTTTTACGTGAGCCAGATTGAAGAACAGATGCAGAGCAGGCCCAAAGGGGAGGAAAGGAGTTCAGGAAAGATGATAATCAATCATCACTCAATGGATCAGACAGTAGTTGATCAGCTGAGTGACTTTGAAGAACAGATGCCAAGCACCCTCCATAGGGAGGGCATCACAACACAGAAAATTAGTGTCAACCACATGATAGTTCCCACAAAAGGTGGCCAGCTGAGCCAGGATCAAGAGGAGGAGAGCAACTTTGTTCAAATGAAGATAGACTTAATACCAGCACCTATTGGTGGAATGATAGATCAAACAAAAGCAGATCAGCCAATCCAGGAGAGAACACAAATGCAGAGAAGCTGCCATGAGAATTTACTGGATGGATGTCAAGGTGAAATCATGTTGGAGAATTCAAAGTGCTCTGCATGTTCAATATGCAAAAGTAGACGTCCAAACAATGCAAGGCCGAAAGACTTTACTTATGAGGAACTCCTAGAAGCTACAGAAGGATTTTCAACTGAGAACTCTCTATCTGAAAGTGAAGATGGACCTACTTTTGAAGGCATGCTAGAGAGACAGGTAAAAATAGTTGTTAAGAAATATCAAATTACTACGTCCCATGAAGAGAAGATATTCAAGTCAGAAGTACAGTTGCTCATCAAAACTAGACATAAAAATGTGGCCATGCTGCTGGGTTTATGTACAAATAAAAGCCAACTGATGATTGTGTATGAGCAAGTATGCAACGGTTCACTTGACCAATACCTAACAAGGGGAAGTTTCCAGTCATTGACTTGGAAGCAAAGGCTGAAAGTAGCAATGGGTACTGCCAGAGGTTTAAAGTACTTACATGGGAATAACATAATTCATGGAAATATAAAACCAAGTAACATTCTTCTAACACATGACTTTGAACCACTGATCGGAGATTACGGCTTCGGAAAAGTGAAACCTGGTCCAAAGAAATCCAGCAAAGATAAAAGTGTAAGAAATTCTGGATATGCAGCACCTGAGTATCTGGAGAATGGGAAACTATCAAATAAGACAGATGTATACTCCTTCGGAGTGGTTCTTTTAGAGCTGATCACTGGCCGGAGGGCTATGGACAAATTACCAGGTGGAAAAAGCCTTGTTGGCTGGGCAAGGCCCCTACTGGGAGGAAAGAAGTACCCACAGTTGGTGGATCCGAAAATCAGTAACTCCTATGAAGAAGACAAACTTCTATGGTTGGTTCAAGTAACAGAACAATGTCTCAGAAAGAATCCTAAGGAAAGATTTACAATGAATATGGTTGTATCTGCACTGCAAGGCATAACAGAATCAGCTGAGTATAGTGTAATTGAAGACTCTTCCCCAGAAAAGTCATATTTAACACATGATGATTCTGCCATGATTAGTACACAAGGTCAAATGAAGGCTGATCCAGTGAAGCAGGAACAAGAATGGATTGACAGAAACCAATATGAGGAGGAAAGAAGCCTAAGATTAACAGTCAAAACCAATGACACGATAGGTCAGAGAAACACAGATCAGCTGATACAGGGTGGAGAAGATGTGCAGAGAAGCCCCCATGAAGAGATGTCCAGAGTAACAGTCATCAGCAATGACATGATTGATCAGATAAACCCTGATCAACAAATCCTGGAAAAACAGCACCTTAAGGGAAGCTTCCACATAGAAGAAATGGGTAAAAAAGTAGATGAGCAACAAAAGGTGAGCAAGGATGAAAAACAAATGCAGGGTAGCTGTGATGAGGGTTTGTTGAATGCGAATGAAGCCAAAATCATTTTGGAGAATTCAAAGTCTTCTGTATGCTCAATTTGCAAAAGTAGGCGTCCAAACAGTGGATTGCAAAAGAAATATACTTATGAAGAACTTCAAGCTGCTACAGAAGGATTTTCCATTAAGTATTCTCTATGTGAAGGTGAATATGGACCTGCTTTCAGAGGCCAGCTAGAGAATAACAAGGAAATAGTTATTAAGCAGCATGCATTCACAAGCTTACAGGAACAGAAGGTGTTTATGTCAGAAATCCAATTGCTCATAAATGCCAGACATGAAAACGTGATCATGCTGTTGGGTTCATGTATACAGTTAAGTCAATTGCTGATTGTATATGAGAAGGCATGCAACGGTTCACTTGACCAGTACTTATCAAGAGATTTTGTGTTTGGAAAAGAAAGATGTGAATTGAAGAATCTCTGCAAGCATAAAAGTAGGCGGAATTGTGGATACACTGCACCAGAGTGTCAAGAGAGTGGAGAATTATCAACAAAGGCAGATGTATACACTTTTGGTGTAGTTCTTGTAGAGTTGATCACCGGCCATATGATTGCAGATAAAAAATCAGGACAGAAATGTCTTGTTGAATGTGTAAGGTCACTTCTTGGAGGAAGAAAGTATCTACAGTTGGTGGACCCCAAACTCGGCAGCTCCTATGATGAACAAGAACTTGTTTCTTGGGTCCATGTAGCAGAAAATTGTCTAAGAAAGAATCCAATGGAAAGGTTCACAATGAACATGGTTGTCTCTGCACTGTCATGTGTAGTAGATAGCAATGACATCTATGGAAAGGAAGACTTTTCATCAGAAAAGTCAAAGTTTTCAGATGTAAAAAACTCAAAAGGTGAGGAGGAATCACTGGAAGAAGATTTAGGCACAGGAAATACTGAAGAGGTAAGGCGGAGTCACGGAGAAGGTGAGAAGGAGGAATCACTGGAGCAAGAAGAAGATTTGGACACAGAGAATAGTGAAAATGTAAGGAGGAACCACAGAGGAGTTGAGAAGGAGGAATCACTGGAGCAAGAAGATACAGACATTGAGAATAGTGAAGGAGAGGACAACACTGCTTGTAGTAAAGGCAATAATGAAACAGAAGTTAGTCATCAAGAGTGTGATAGCTACACAAAATGTGTTGAAAGTAGTAAGGAAACAGAAGAAAAAGAAAGCTCAAGCACCAAGGTATGTCAATGGGAATGGTGCTTATCTTATGGTGGAGCTAGAGAGTTTTATCTCCAAGGGGCTCAAGAATACACAGTATGTGAAGAATTTTTCGGCTGGTGTGATTGCATTTGA 5007 0.3988 MSCHLGFNGLSIVQDCNWKSGMEYKSLETSGRLSNFFYQQMGYRITVDKQLLGVNQRIIEKELANKKEEYLIDEGLAQIVKHYELNKVAFKIKLFPGSSPKGVALEQAINLKATWVILDRQMKKDEEFFLKKLSCGISILRRNNRIVHLRGPIDLPDVIQCNSHETYESLPSSRSSRKPNITTNNLMIGTLEVDELNQIQSRPFKEEGCSNITTNINEKTCQTMDGAEINSNQMIDKIERDEQGHDQEQMQSLPHEMEGDTTIVIKSDQTTAREIEKSILENSMNTFCSVCKTRRPNIGRQKEFTYEELHAATDAFSLTNCLSESGSLFTFRGQLEGGMKLVVKQHDVTNTKVREKVKSEIQTILKARHKNVIMLLGSSTAECFLYTVYEYACNGSLDKYISKDSSRPLTWIERKRVAIGLARGLKYLHDNSIVHCNIKPSNILLTHDFKPLIGDFGFGKELELKSYKNKNKGNYEYIAPEYQEKGKLSTKTDVYSFGVVILELITGRRTTDLMSEDKSLIEWAKPLLKRKKYSELVDPKIRNSYEEDHLRWLVQVTTQCLKKNPKERLSMNMAVSALQGIADSELCHMTEDITPAISDSRIVPDINGSQGPTTTKADQPSQEEEQIESRFYGEEKKLTLKVEKNHFYVSQIEEQMQSRPKGEERSSGKMIINHHSMDQTVVDQLSDFEEQMPSTLHREGITTQKISVNHMIVPTKGGQLSQDQEEESNFVQMKIDLIPAPIGGMIDQTKADQPIQERTQMQRSCHENLLDGCQGEIMLENSKCSACSICKSRRPNNARPKDFTYEELLEATEGFSTENSLSESEDGPTFEGMLERQVKIVVKKYQITTSHEEKIFKSEVQLLIKTRHKNVAMLLGLCTNKSQLMIVYEQVCNGSLDQYLTRGSFQSLTWKQRLKVAMGTARGLKYLHGNNIIHGNIKPSNILLTHDFEPLIGDYGFGKVKPGPKKSSKDKSVRNSGYAAPEYLENGKLSNKTDVYSFGVVLLELITGRRAMDKLPGGKSLVGWARPLLGGKKYPQLVDPKISNSYEEDKLLWLVQVTEQCLRKNPKERFTMNMVVSALQGITESAEYSVIEDSSPEKSYLTHDDSAMISTQGQMKADPVKQEQEWIDRNQYEEERSLRLTVKTNDTIGQRNTDQLIQGGEDVQRSPHEEMSRVTVISNDMIDQINPDQQILEKQHLKGSFHIEEMGKKVDEQQKVSKDEKQMQGSCDEGLLNANEAKIILENSKSSVCSICKSRRPNSGLQKKYTYEELQAATEGFSIKYSLCEGEYGPAFRGQLENNKEIVIKQHAFTSLQEQKVFMSEIQLLINARHENVIMLLGSCIQLSQLLIVYEKACNGSLDQYLSRDFVFGKERCELKNLCKHKSRRNCGYTAPECQESGELSTKADVYTFGVVLVELITGHMIADKKSGQKCLVECVRSLLGGRKYLQLVDPKLGSSYDEQELVSWVHVAENCLRKNPMERFTMNMVVSALSCVVDSNDIYGKEDFSSEKSKFSDVKNSKGEEESLEEDLGTGNTEEVRRSHGEGEKEESLEQEEDLDTENSENVRRNHRGVEKEESLEQEDTDIENSEGEDNTACSKGNNETEVSHQECDSYTKCVESSKETEEKESSSTKVCQWEWCLSYGGAREFYLQGAQEYTVCEEFFGWCDCI 1668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02203 1668 MobiDBLite consensus disorder prediction 1510 1608 - -
Pumo1g02203 1668 SUPERFAMILY Protein kinase-like (PK-like) 1262 1488 IPR011009 -
Pumo1g02203 1668 ProSiteProfiles Protein kinase domain profile. 815 1091 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02203 1668 MobiDBLite consensus disorder prediction 241 260 - -
Pumo1g02203 1668 MobiDBLite consensus disorder prediction 1559 1576 - -
Pumo1g02203 1668 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 392 595 - -
Pumo1g02203 1668 FunFam Proline-rich receptor-like protein kinase PERK8 777 890 - -
Pumo1g02203 1668 SUPERFAMILY Protein kinase-like (PK-like) 799 1084 IPR011009 -
Pumo1g02203 1668 FunFam Proline-rich receptor-like protein kinase PERK8 1239 1352 - -
Pumo1g02203 1668 Gene3D Phosphorylase Kinase; domain 1 288 391 - -
Pumo1g02203 1668 MobiDBLite consensus disorder prediction 1510 1547 - -
Pumo1g02203 1668 FunFam Proline-rich receptor-like protein kinase PERK8 278 391 - -
Pumo1g02203 1668 MobiDBLite consensus disorder prediction 601 626 - -
Pumo1g02203 1668 Gene3D Phosphorylase Kinase; domain 1 1238 1351 - -
Pumo1g02203 1668 Gene3D Phosphorylase Kinase; domain 1 779 889 - -
Pumo1g02203 1668 ProSiteProfiles Protein kinase domain profile. 316 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02203 1668 MobiDBLite consensus disorder prediction 603 620 - -
Pumo1g02203 1668 PANTHER OS01G0253100 PROTEIN 1382 1495 - -
Pumo1g02203 1668 SUPERFAMILY Protein kinase-like (PK-like) 301 599 IPR011009 -
Pumo1g02203 1668 Pfam Protein kinase domain 340 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02203 1668 Pfam Protein kinase domain 1388 1487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02203 1668 Pfam Protein tyrosine and serine/threonine kinase 821 1079 IPR001245 GO:0004672|GO:0006468
Pumo1g02203 1668 Pfam Protein tyrosine and serine/threonine kinase 1279 1365 IPR001245 GO:0004672|GO:0006468
Pumo1g02203 1668 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 891 1091 - -
Pumo1g02203 1668 Gene3D Transferase(Phosphotransferase) domain 1 393 598 - -
Pumo1g02203 1668 Gene3D Transferase(Phosphotransferase) domain 1 891 1106 - -
Pumo1g02203 1668 Gene3D Transferase(Phosphotransferase) domain 1 1362 1517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02203 Pumo-Chr1 51476490 51491817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02203 304 601 Trihelix Transcription Factor Family AT5G38560 35.669 1.24e-53 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pumo1g02203 PK_Tyr_Ser-Thr 3.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02203 - - gsj:114401847 2489.92