Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02195 ATGGCCATGGCAGCCCCGGGGCAACTCAACGTGAACGAGTCACCTTCGTGGGGTTCCAGAAGCGTCGATTGCTTCGAGAAGTTGGAGCAAATTGGCGAGGGCACATATGGTCAGGTTTACATGGCTAGAGAGATCAAAACTGGTGAAATTGTTGCTCTGAAGAAAATACGAATGGACAATGAGAGAGAAGGGTTTCCTATAACTGCCATACGTGAAATCAAAATTCTAAAGAAACTACACCATGAAAATGTAATCAAGTTGAAAGAAATTGTGACTTCTCCAGGCCCCGAGAAAGATGAACAAGGGAGGCCAGACGGTAACAAATATAAAGGTGGCATCTATATGGTCTTTGAATACATGGACCATGATTTGACAGGTCTTGCTGACCGACCTGGGATGAGATTCACAGTTCCCCAAATTAAGTGTTACATGAGACAGCTTCTGACTGGGCTGCATTACTGTCACGTAAATCAAGTACTTCACCGTGATATCAAAGGTTCAAATCTTCTCATAGATAATGAAGGGCTAATTGGAATGCCATTGACGGTGTCTGGCTTATTGCTGGATCTAACCTTAATTCTTTTCAAGAATTTAGTTACCTACCCAGAACAATTAAATAAGATTTTTGAGCTGTGCGGAGCACCAGATGAGGTGAACTGGCCTGGTGTTTCTAAGACTCCTTGGTATAATCAATTTAAGCCAACAAGACCAATGAAAAGACGTCTCCGGGAAGTTTTCAGACATTTTGATCGTCATGCTCTGGAATTGTTGGAGAAGATGCTGACACTTGATCCTGCTCAGTTATCTAACATGTTTTACAAATTGCCTTTTGAGCTTATGACAGAAATGGTATCATCTGGTTTTAGTTCTGAGTGA 876 0.4201 MAMAAPGQLNVNESPSWGSRSVDCFEKLEQIGEGTYGQVYMAREIKTGEIVALKKIRMDNEREGFPITAIREIKILKKLHHENVIKLKEIVTSPGPEKDEQGRPDGNKYKGGIYMVFEYMDHDLTGLADRPGMRFTVPQIKCYMRQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGLIGMPLTVSGLLLDLTLILFKNLVTYPEQLNKIFELCGAPDEVNWPGVSKTPWYNQFKPTRPMKRRLREVFRHFDRHALELLEKMLTLDPAQLSNMFYKLPFELMTEMVSSGFSSE 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02195 291 PANTHER CELL DIVISION PROTEIN KINASE 23 175 - -
Pumo1g02195 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Pumo1g02195 291 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Pumo1g02195 291 Pfam Protein kinase domain 25 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02195 291 Gene3D Phosphorylase Kinase; domain 1 12 121 - -
Pumo1g02195 291 SUPERFAMILY Protein kinase-like (PK-like) 19 267 IPR011009 -
Pumo1g02195 291 SMART serkin_6 25 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02195 291 Gene3D Transferase(Phosphotransferase) domain 1 194 271 - -
Pumo1g02195 291 Gene3D Transferase(Phosphotransferase) domain 1 122 193 - -
Pumo1g02195 291 FunFam Cyclin-dependent kinase C-2 12 121 - -
Pumo1g02195 291 ProSiteProfiles Protein kinase domain profile. 25 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02195 Pumo-Chr1 50919291 50925289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02195 1 267 Core Cell Cycle Gene Families AT5G10270 70.064 1.53e-149 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pumo1g02195 Pkinase 1.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02195 K08819 - gmx:100793565 473.781