Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02192 ATGAATGGGCAAAAAATTAAGCGCCGAGTGGGTAAATATGATGTAGGAAGAACCATTGGGGAGGGAACATTTGCAAAGGTGAAGTTTGCAAGGAACTCTCAGACTGGGGAGCCTGTGGCTCTCAAGATTCTTGACAAAGAAAAGGTTCTCAAGTATATGATGGCTGAGCAGATCAGGCGTGAAATTGCCACAATGAAGTTAATCAAGCATCCAAATGTTGTTCAACTATATGAGGTCATGGGGAGCAAGACAAAAATATACATTATTCTAGAGTTTGCGACTGGGGGAGAGCTCTTTGACAAAATTGTAAAAGATGGACGGAGGAGTGAAAAGGAAGCTCGTAGGTATTTCCAGCAGCTTATAAATGCTGTTGATTATTGCCATAGCAGGGGTGTCTACCACAGAGACCTGAAACTAGAGAACTTGCTATTAGATGCTTCTGGGAACCTTAAAATTTCTGATTTTGGATTGAGTGCACTTTCCCAACAAGTCAGGGATGATGGACTGCTCCATACAACATGCGGAACTCCAAATTATGTTGCTCCTGAGGTCCTGGATGACAGAGGCTATGATGGGGCAGCTGCAGATTTGTGGTCATGTGGCGTGATCCTCTTTACATTGCTTGCAGGTTACTTGCCTTTTGATGACACTAATGTTTTGAACCTGTATAGAAAAATTTCAGCTGCTGAATTTACTAGCCCTCCTTGGCTTTCTTTTAGTGCCAGGAAATTGATAACTAGAATCTTGGATCCCAACCCCATGACTCGTATCACTGTACCTGAGATTTTGCGTGATGAATGGTTTAAGAAAGACTATAAACCTCCAGTTTTCGAGGAGACAAAGGAGACCAATGTTGATGACGTGGAAGCCGTCTTTAAAGATTATGAAGTGCACAATGTAAGAGAGAAGGAAGAGCAGCCAACACCTATGAATGCATTTGAATTGATATCCTTGTCCAAAGGGCTGAACCTTGAAAACTTGTTTGACATAGACCAGGGATTTAAAAGGGAAATAAGGTTTACATCAAAAAGCCCTGCCAATGACATAATCAAGAAGATTGAAGAAGCTGCAAAACCTCTTGGTTTTAATGTGCAGAAGAAAAATTTCAAGATGAAGCTTGAAAATGTGAAAGCTGGAAGGAAGGGAAACCTCAATGTTGCCACAGAGATATTTCAAGTGGCACCTTCTCTTCACGTGGTTAAGGTGCATAAAGCAAAAGGTGACACATTGGAGTTCCTTAAGTTCTACAACAAGCTTTCAACACGCTTGGAGGATGTTGTTTGGAAAACTGAAGATGACATGGAAGATACAAAGTGA 1317 0.4138 MNGQKIKRRVGKYDVGRTIGEGTFAKVKFARNSQTGEPVALKILDKEKVLKYMMAEQIRREIATMKLIKHPNVVQLYEVMGSKTKIYIILEFATGGELFDKIVKDGRRSEKEARRYFQQLINAVDYCHSRGVYHRDLKLENLLLDASGNLKISDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLDDRGYDGAAADLWSCGVILFTLLAGYLPFDDTNVLNLYRKISAAEFTSPPWLSFSARKLITRILDPNPMTRITVPEILRDEWFKKDYKPPVFEETKETNVDDVEAVFKDYEVHNVREKEEQPTPMNAFELISLSKGLNLENLFDIDQGFKREIRFTSKSPANDIIKKIEEAAKPLGFNVQKKNFKMKLENVKAGRKGNLNVATEIFQVAPSLHVVKVHKAKGDTLEFLKFYNKLSTRLEDVVWKTEDDMEDTK 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02192 438 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Pumo1g02192 438 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 414 - -
Pumo1g02192 438 Gene3D Transferase(Phosphotransferase) domain 1 93 297 - -
Pumo1g02192 438 FunFam Non-specific serine/threonine protein kinase 4 92 - -
Pumo1g02192 438 Gene3D Phosphorylase Kinase; domain 1 4 92 - -
Pumo1g02192 438 CDD CIPK_C 311 425 - -
Pumo1g02192 438 CDD STKc_SnRK3 12 267 - -
Pumo1g02192 438 Pfam NAF domain 307 366 IPR004041 GO:0007165
Pumo1g02192 438 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02192 438 FunFam Non-specific serine/threonine protein kinase 304 429 - -
Pumo1g02192 438 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02192 438 Gene3D Kinase associated domain 1, KA1 304 429 - -
Pumo1g02192 438 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02192 438 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Pumo1g02192 438 SUPERFAMILY Protein kinase-like (PK-like) 9 306 IPR011009 -
Pumo1g02192 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Pumo1g02192 438 FunFam Non-specific serine/threonine protein kinase 6 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02192 Pumo-Chr1 50655718 50661912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02192 4 390 CBL-interacting serine-threonine protein kinases AT2G26980 80.670 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo1g02192 Pkinase 1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02192 - - pvy:116136070 754.207