Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02185 ATGAAGAAGCTTTCTCTTTATACTTGTTTACTCAATTTGAGTCTCTTGGTTCTTCTTCCCTACAGCAAAGCCAGTCAGGCTGATAAACTTCAAGAGTTGATTCTGTCTAAGAGCTCACAGCAGAAGCCTCCAGTGACCCTTTCCTGGGCAGAGGAAGATGCAGTGAAAACTCACTCTTCTGCTTATGTTGCACCTCAAGAGGGGCAAAAGGAAGCTGACAAGATTGTGGCATTGCCTGGCCAGCCCTATGGGGTGAATTTTGACCAATATTCAGGCTATGTCACTGTTGATCCAAATGCTGGAAGAGCACTTTTCTATTATTTTGTGGAGTCTCCATATAACCCTTCAACTAAACCTTTAGTTTTGTGGCTAAATGGAGATTTTGAAATTCACAGGACCTGGTTGTTCCTCATTGGGGTATATGATTTTGACCCGTGTTCTGATTACTACGGGGAAGCCTATCTAAATAGGCCAGAGGTCCAACTAGCTCTTCATGCAAAACCCACAAACTGGACCCACTGCAGTGGAGATACTGATTCAGTGGTGCCAGTCACATCTTCCAGATATTCAATCAACACCCTCAACCTCCCTATCCAGGCTCCTTGGCGTCCATGGTATTCTGGAAATGAGGTTGGAGGATATGTGGTGAAATACAACGGAGTGACATTTGTTACAGTAAGAGGAGCAGGACATCTGGTTCCAAGCTGGCAACCATCACGGGCTCTGACTTTGATCTACTCATTCCTCTTTGGAAGCCTGCCTCCTGCTTCACCATGGAAGGGTTACTAA 789 0.4525 MKKLSLYTCLLNLSLLVLLPYSKASQADKLQELILSKSSQQKPPVTLSWAEEDAVKTHSSAYVAPQEGQKEADKIVALPGQPYGVNFDQYSGYVTVDPNAGRALFYYFVESPYNPSTKPLVLWLNGDFEIHRTWLFLIGVYDFDPCSDYYGEAYLNRPEVQLALHAKPTNWTHCSGDTDSVVPVTSSRYSINTLNLPIQAPWRPWYSGNEVGGYVVKYNGVTFVTVRGAGHLVPSWQPSRALTLIYSFLFGSLPPASPWKGY 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02185 262 Gene3D - 146 176 - -
Pumo1g02185 262 Gene3D - 177 252 - -
Pumo1g02185 262 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 146 238 IPR001563 GO:0004185|GO:0006508
Pumo1g02185 262 ProSitePatterns Serine carboxypeptidases, histidine active site. 221 238 IPR033124 GO:0004185
Pumo1g02185 262 Gene3D alpha/beta hydrolase 68 130 IPR029058 -
Pumo1g02185 262 SUPERFAMILY alpha/beta-Hydrolases 71 126 IPR029058 -
Pumo1g02185 262 Pfam Serine carboxypeptidase 175 250 IPR001563 GO:0004185|GO:0006508
Pumo1g02185 262 Pfam Serine carboxypeptidase 79 126 IPR001563 GO:0004185|GO:0006508
Pumo1g02185 262 SUPERFAMILY alpha/beta-Hydrolases 135 254 IPR029058 -
Pumo1g02185 262 FunFam Carboxypeptidase 160 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02185 Pumo-Chr1 50422561 50425746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02185 175 251 Calmodulin-binding Proteins AT2G22960 34.615 1.55e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02185 K16297 - gmx:100807212 241.121