Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02155 ATGGGGTGTCACAAAATTGAAGGGAGAGACCCTATACTGCACAGGGTTGGAGGAGGAAGGTATACTTGGTCACCAAAAGTTAACTTCACAAAGTGGGCAAGTCATGAGCACTTCTACAAGGGTGATTGGCTATATTTTGGTTTTGACAAGCGCATCTACAATGTTTTGGAGGTGAACAAAACAAATTATGAGAATTGTATCGACACTGGCTTCATAAATAACATCACAAGAGGAGGGAGAGATGTTTTCCAACTCTTAGAGGCAAGGCCATATTATTTCCTCTGTGGCAGAGGCTTCTGCTTTCAGGGAATGAAATTTGCAATAAATGTTGAGGAGCCCACAGCAGCACTACCACCACCAGCATTGGCCAACAATGCCCTTCGATCAAGTAGAATGAGTAATACTAAACTGCTTGCGCTTCTAGTCACAGTTTTGGCATGGACCTTCATGTATCATAGACTTTAG 465 0.428 MGCHKIEGRDPILHRVGGGRYTWSPKVNFTKWASHEHFYKGDWLYFGFDKRIYNVLEVNKTNYENCIDTGFINNITRGGRDVFQLLEARPYYFLCGRGFCFQGMKFAINVEEPTAALPPPALANNALRSSRMSNTKLLALLVTVLAWTFMYHRL 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02155 154 SUPERFAMILY Cupredoxins 14 110 IPR008972 -
Pumo1g02155 154 Gene3D - 13 118 IPR008972 -
Pumo1g02155 154 PANTHER BLUE COPPER PROTEIN 14 121 IPR039391 GO:0009055
Pumo1g02155 154 ProSiteProfiles Phytocyanin domain profile. 12 112 IPR003245 GO:0009055
Pumo1g02155 154 FunFam Lamin-like protein 11 113 - -
Pumo1g02155 154 Pfam Plastocyanin-like domain 23 104 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02155 Pumo-Chr1 49352732 49353298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02155 13 125 Phytocyanin Superfamily AT2G27035 61.947 2.24e-52 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02155 - - ccaj:109799995 256.144