Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02145 ATGATGATGTTTGAAGATATGGGGTTTTGTGGGGATTTGGATATGTTTTCTGCTCCCTTTGTAGAAGGGGATATTACCGCCCGGCAAACTGAACCAGAGGCGATAGTTGAGGATGATTACAGTGATGAAGAAATTGATGTAGACGAGCTCGAGCGGAGGATGTGGAGGGACAAAATGCGTCTCAAGCGATTGAAGGAGCAAAGTAAACCTAAGGAAGGGATTGATGCGGTCAAGCAGAGGCAGTCCCAAGAACAGGCAAGGAGGAAAAAGATGTCGAGGGCTCAAGATGGGATCTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCCCAAGGTTTTGTCTATGGGATAATTCCTGAGAAGGGAAAGCCGGTGACCGGGGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTCCGGTTTGATCGCAACGGTCCAGCTGCAATAGCCAAGTATCAAGCTGATAATGCAATTCCAGGGAAGAATGATGGATGCAATTCAATTGGCCCAACTCCACACACCTTGCAAGAGTTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAGCACTGCGATCCCCCTCAGAGGCGGTTTCCACTGGAGAAGGGTGTTCCTCCACCATGGTGGCCCACAGGGAATGAAGAGTGGTGGCCACAAATAGGTTTACCTAAAGAACAAGGTCCTCCTCCTTACAAGAAACCTCATGACCTGAAGAAGGCATGGAAAGTTGGTGTTCTGACTGCAGTTATCAAGCACATGTCTCCTGATATCGCCAAAATTCGCAAGCTTGTGAGGCAGTCCAAATGCCTTCAAGATAAGATGACAGCCAAGGAAAGTGCAACCTGGCTTGCAATCATCAATCAAGAGGAGGCCTTGGCACGCGAGCTTTACCCTGATTATTGCCCCCCATTAGCCTCTTCTGGAGGAAGTGGATCCATGGTCATCAATGATTGCAACTGA 975 0.4831 MMMFEDMGFCGDLDMFSAPFVEGDITARQTEPEAIVEDDYSDEEIDVDELERRMWRDKMRLKRLKEQSKPKEGIDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEEWWPQIGLPKEQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPLASSGGSGSMVINDCN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02145 324 SUPERFAMILY DNA-binding domain of EIN3-like 174 299 IPR023278 GO:0003700|GO:0005634
Pumo1g02145 324 Gene3D - 80 158 IPR023278 GO:0003700|GO:0005634
Pumo1g02145 324 Gene3D - 172 305 IPR023278 GO:0003700|GO:0005634
Pumo1g02145 324 MobiDBLite consensus disorder prediction 64 91 - -
Pumo1g02145 324 Pfam Ethylene insensitive 3 48 295 IPR047091 GO:0003700
Pumo1g02145 324 Coils Coil 33 67 - -
Pumo1g02145 324 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 16 323 IPR006957 GO:0003700|GO:0005634
Pumo1g02145 324 FunFam Ethylene insensitive 3-like 1 80 158 - -
Pumo1g02145 324 FunFam Ethylene insensitive 3-like 1 168 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02145 Pumo-Chr1 49022201 49023175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02145 2 324 EIL Transcription Factor Family AT3G20770 84.000 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Pumo1g02145 EIN3 1.7e-131 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02145 K14514 - gmx:100777079 657.907