Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02133 ATGGCTAGGAAGAAAGCATGTGCTATAATTTATACTCCAAATAATCCTCAGCCAGAACGGCCATCTGATTGGGGAGTCCAAAGTGTGCTTTCCAAGTTTAGGAGTGTGTCTGAACTGGAACAAACCAAAAAAAAGTTGTGTCAAGAGAGATTTTTGAGGCAGAGGATCATCAAAGCCCAAATACAACTGAGGAAACTGAGGAATGAAATTAGGAAAAAAGAGGTGACCCTTCTCATGTTTCAGCACCTTAATACTAGGAACAATTTTGATAATGTTAGCATGATTGATTTGAATGATATCTCAAACTTGATTGATCAAAACTTGGAGGAAATAGAAAGGAAGATCAATATGAGCCAAGCCCAAAAGATGAAACCAGATGTTGACAATGGAGGAGAAACCATGAGTCAAGGAGAGCAAGCACTTATGAATCATGCCCAAGGGCCAGAAACCAATGTGGATGCCATGCAAAAAATTGATGAAATCAGAATGCTTTGTGGGATTAAAGCATGTGCTATAATTTATGCTCAAGATAATCCTCAGTCAAAGGTTTGGTCGTCTGATTGGGGAGTCCAAAGTGTGCTTTTCAGGTTCAGGAGAGTGTTTGCAATGGAAGAAAGCATAAAAGAATTGCATCAAGGTAGCTTTTTGAGGGAGAGGATCATCAAAGCCCAAGTAAAACTGAGAAAGCTAAGGAATAAAATTAAGAAGAAAGAGGTGACCCTTCTCATTTTTCATCACCTTAATGCTAGGAACAATTTTTATAATGCCAACATGATTGATTTGAATGATATCTCAAACTTAATTGATCAAAACTTGGAGGAAATAGAAAGGAAAATCAATATGAGTTAA 849 0.3746 MARKKACAIIYTPNNPQPERPSDWGVQSVLSKFRSVSELEQTKKKLCQERFLRQRIIKAQIQLRKLRNEIRKKEVTLLMFQHLNTRNNFDNVSMIDLNDISNLIDQNLEEIERKINMSQAQKMKPDVDNGGETMSQGEQALMNHAQGPETNVDAMQKIDEIRMLCGIKACAIIYAQDNPQSKVWSSDWGVQSVLFRFRRVFAMEESIKELHQGSFLRERIIKAQVKLRKLRNKIKKKEVTLLIFHHLNARNNFYNANMIDLNDISNLIDQNLEEIERKINMS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02133 282 Coils Coil 220 240 - -
Pumo1g02133 282 Coils Coil 49 76 - -
Pumo1g02133 282 SUPERFAMILY SRF-like 155 220 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02133 Pumo-Chr1 48631438 48641759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02133 158 279 Type I MADS-box Gene Family AT5G48670 37.705 1.06e-22 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02133 - - gmx:102664096 227.639