Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02126 ATGAGTTTGAGAAATGTAGTCTTAGTTGCTTTAGTGCTTCTGCCACACATGGCTTATCCGGGTTCAATTGTGAAGAACCTGCCAGGTTACGATGGTGATCTTCCATTCAAACTTGAAACTGGATACATAGCAGTGGGAGAAGGAGAAGGGGTGCAACTATTTTACTTATTTGTGGAGTCTCAGAGAAATCCATTCATTGATCCACTGTTACTTTGGTTCGTTGGAGGTCCTGGTTGCTCCGCCCTATCGGCGTTCTTTTTTGAAAATGGGCCTTTAGTAATGAATGAGAATTATAGTGGAAACCTTCCAAAACTTGAGTTGAACCCATATGCGTGGTCACACACGTTGAATATGTTATATATAGACATTCCAGTAGGCACCGGATTTTCATACTCAGAAACGCAAGAAGGCTATATCAGTAGTGACATACTGTGGGTGGAGCATACTTATGAATTTCTACAAAAGTGGTTTATTGATCATCCAAAGTTTAGCTCAAATCGTTTTTACATTGGTGGTGGCTCATATTCAGGAATAACTGTTGGTCCTCTTGTTCAAAAAGTAAATGAAGGTTACAAAGCAAGACACAAGCCACTCATGAACATCAAAGGTTATTTACTCGCGAGCCCAGCTATTGACCAGTTTCAAGAACAGAACAAGAAAGTTTTATATGCATACCAAAGGTCTCTTATACCAGAAGCACTCTATAAGTCGATGAAAGAAAATTGTAACGGTGATTATATGAACATTGATCCAGAAAACACAAAGTGTGTCTCAGATTATGAATATTATTCTGAGCTAGTTCGTTACATTAACGAACAACAAATTATGGAACCTCTTTGCATTACTACGCCCGGTGTGAATCGAGAAATTCTACAAGAAGTTCAAGATCCTCCAACATTCTGGTGTAGAAGCTATTATCATATCCTTGTTGACACATGGGCAAATGATGAAAATGTGCGGAAGGCCATTCATGTAAGAGAGGGAACTAAAGAGGAATTCCTGAGATGCAACAGGACTATGGCATACACCACAACTCGGCGAAACACAGTAGAATTTTATCGGAATCTCACTAATGCCAATCTTGAAGCTCTCGTTTACTGTGCTGATCTGGATATGAGTATACCACACCTGGGTACACAATATTGGATCAATTCATTCAACATGAGCATACGTGACAAATGGCGTGCATGGTTTGTTGACGGTCAAGTGGCCGGATACACAGAAGTCTACAAACCGAAAGAAGACCACTACTTAACATATGTGATCGTGAAGGGTGCTGGACATGTGGCCCAGACATTTAAACCCAAGGAAGTTTATCATTTGATCAATAGATGGTTTTCATTTTCTCTTATTTAA 1356 0.3975 MSLRNVVLVALVLLPHMAYPGSIVKNLPGYDGDLPFKLETGYIAVGEGEGVQLFYLFVESQRNPFIDPLLLWFVGGPGCSALSAFFFENGPLVMNENYSGNLPKLELNPYAWSHTLNMLYIDIPVGTGFSYSETQEGYISSDILWVEHTYEFLQKWFIDHPKFSSNRFYIGGGSYSGITVGPLVQKVNEGYKARHKPLMNIKGYLLASPAIDQFQEQNKKVLYAYQRSLIPEALYKSMKENCNGDYMNIDPENTKCVSDYEYYSELVRYINEQQIMEPLCITTPGVNREILQEVQDPPTFWCRSYYHILVDTWANDENVRKAIHVREGTKEEFLRCNRTMAYTTTRRNTVEFYRNLTNANLEALVYCADLDMSIPHLGTQYWINSFNMSIRDKWRAWFVDGQVAGYTEVYKPKEDHYLTYVIVKGAGHVAQTFKPKEVYHLINRWFSFSLI 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02126 451 Gene3D alpha/beta hydrolase 20 289 IPR029058 -
Pumo1g02126 451 FunFam Carboxypeptidase 301 449 - -
Pumo1g02126 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 108 120 IPR001563 GO:0004185|GO:0006508
Pumo1g02126 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 181 IPR001563 GO:0004185|GO:0006508
Pumo1g02126 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 131 IPR001563 GO:0004185|GO:0006508
Pumo1g02126 451 PRINTS Carboxypeptidase C serine protease (S10) family signature 418 431 IPR001563 GO:0004185|GO:0006508
Pumo1g02126 451 SUPERFAMILY alpha/beta-Hydrolases 24 447 IPR029058 -
Pumo1g02126 451 FunFam Serine carboxypeptidase-like 19 17 285 - -
Pumo1g02126 451 Gene3D - 302 449 - -
Pumo1g02126 451 Pfam Serine carboxypeptidase 28 447 IPR001563 GO:0004185|GO:0006508
Pumo1g02126 451 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 435 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02126 Pumo-Chr1 48198946 48257558 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02126 16 47 Calmodulin-binding Proteins AT2G22960 62.500 4.74e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02126 K16296 - gmx:100798023 581.637