Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02125 ATGGGGATTCAGACAATGGGATCTCAAGGTAGTGGGCAACAGTCTCATTTACAGCCTTCTTCATTGTCTAGGCAAGGTTCATGGTATAGTCTCACTCTTGATGAGGTCAATAGTCAATTAGGAGACATGGGGAAGCCATTGGGGAACATGAACCTTGATGAGCTTCTTCAAAATGTGTGGACTGCTGAAGCAAGCAAGTCTTCGGTGATAGGCGTGGAGAGTGAGAACATGTCATCCTCTTCCTCGCTTCAACGGCAAGCCAGCTTGACGCTGGCTCGCGCATTGAGTGGGAAGACGGTGGATGATGTGTGGAGGGAAATTCAGCAGGGTCAGAAGAAAAGGTATGGAGAGGAAGTGAAGAGTCAGGAGGGAGAAATGACTCTTGGTGAGACCACATTGGAGGATTTCTTGGTGCAAGCAGGGCTTTTTGCTGAAGCTTCTATCAGTCCAGCTGTGGGGTTGGATACAATGGATTCCCCCGCCGCGCAAGGTTTCCAACAGAAAACAGGCCTGTCATCCTCCCCTTCATTTGGCAGTTTATCAGACACGAGACCGGGCCGAAAAAGGGATGCTCCTGATGCGTATGAGAAAACTTTAGAAAGGAGGCTGAGGAGGAAGATCAAGAATAGGGAATCTGCTGCTCGGTCCCGAGCCCGAAAACAGGCTTATCATAATGAACTGGTTAGCAAGGTTTCCCGTCTAGAAGAAGAAAATGTAAAGCTCAAGAAAGAGAAGGAATTTGAAGAAAGGTTACCGCCTGATCCATTGCCTGAACCAAAATATCAGCTTAGAAGACATAATTCTGCCTCTTTCTGA 816 0.4767 MGIQTMGSQGSGQQSHLQPSSLSRQGSWYSLTLDEVNSQLGDMGKPLGNMNLDELLQNVWTAEASKSSVIGVESENMSSSSSLQRQASLTLARALSGKTVDDVWREIQQGQKKRYGEEVKSQEGEMTLGETTLEDFLVQAGLFAEASISPAVGLDTMDSPAAQGFQQKTGLSSSPSFGSLSDTRPGRKRDAPDAYEKTLERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENVKLKKEKEFEERLPPDPLPEPKYQLRRHNSASF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02125 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Pumo1g02125 271 MobiDBLite consensus disorder prediction 183 207 - -
Pumo1g02125 271 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 199 251 - -
Pumo1g02125 271 SMART brlzneu 197 269 IPR004827 GO:0003700|GO:0006355
Pumo1g02125 271 MobiDBLite consensus disorder prediction 165 181 - -
Pumo1g02125 271 CDD bZIP_plant_BZIP46 201 238 - -
Pumo1g02125 271 MobiDBLite consensus disorder prediction 214 261 - -
Pumo1g02125 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Pumo1g02125 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 267 IPR043452 GO:0003700|GO:0045893
Pumo1g02125 271 SUPERFAMILY Leucine zipper domain 201 247 IPR046347 GO:0003700|GO:0006355
Pumo1g02125 271 Gene3D - 199 251 - -
Pumo1g02125 271 MobiDBLite consensus disorder prediction 1 23 - -
Pumo1g02125 271 Pfam bZIP transcription factor 201 245 IPR004827 GO:0003700|GO:0006355
Pumo1g02125 271 Coils Coil 224 251 - -
Pumo1g02125 271 MobiDBLite consensus disorder prediction 165 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02125 Pumo-Chr1 48169903 48174588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02125 21 271 bZIP Transcription Factor Family AT3G56850 47.203 1.48e-66 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo1g02125 bZIP_1 2.9e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02125 K14432 - gmx:100798549 439.884