Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02114 ATGATTATGAATTTAACAATATCTGAACAATGTTATGCATCTTTCTTGTTACAGAATCTTGTAAATTTAAAGACAATTATCCTTCGGGACTCCAGAGACCTGATTGAGATGCCAGACTTATCCAAGGCAGAAAAACTTGAAATTGTTTATCTTAGTGGATGTGAAAGCTTGCGTGAGCTCCATCCATCCATATCATCTCTCCACAATCTTAGAGAATTGTCTATAAATTTTTGCAGATGGATTGAAAGCCTTAATGTTCATTCAAAATCTCTCCAACAATTGTACGCCGTTGATTGTTCATCTCTCAAGAAATTCTCAATGACATCAGTGAAAATGACGTCGATGAACTTATCTGCCACCTCCATATGTGCAACTTCGTCATCAATTTGTTATAACAATCTTGACGAGTTATCATATGACTCGGGAATGGGATCCATTACAGCACCAGACCATTATGGATGCATGCAGCACAATGCATCAAAATTGTCTTTAGAAGATTCGTGGCTAACAGAAAATAATGCTGAGAGCTTGCTTGCAAACATAAAAAATCTTTCATCTGAGAGATGCCTTTCGTTAATGCGCTGCAGTAAACTTGTGTCTCTGTCGGAGCTTCCACCATCCCTAACATATCTTCGCTTAGATGGTTGCAGTAAACTTGTGTCTCTGCCAGAGCTTCCACCATCCTTAACATATCTTTTCTTAGATGGTTGCAGTAAACTTGTGTCTCTGCCGGAGCTCCCACCATTGTTGAATGAGGGTTGGAGACAAATACCACCAAGAGAGCATAAAAGAGTGTGGGGTCTTCCCAGTATATGCCTCAGAATCGGGGTTGAAGTTGTTTGA 843 0.3962 MIMNLTISEQCYASFLLQNLVNLKTIILRDSRDLIEMPDLSKAEKLEIVYLSGCESLRELHPSISSLHNLRELSINFCRWIESLNVHSKSLQQLYAVDCSSLKKFSMTSVKMTSMNLSATSICATSSSICYNNLDELSYDSGMGSITAPDHYGCMQHNASKLSLEDSWLTENNAESLLANIKNLSSERCLSLMRCSKLVSLSELPPSLTYLRLDGCSKLVSLPELPPSLTYLFLDGCSKLVSLPELPPLLNEGWRQIPPREHKRVWGLPSICLRIGVEVV 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02114 280 SMART LRR_bac_2 205 225 - -
Pumo1g02114 280 SMART LRR_bac_2 226 246 - -
Pumo1g02114 280 SUPERFAMILY L domain-like 17 251 - -
Pumo1g02114 280 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 17 252 - -
Pumo1g02114 280 Gene3D Ribonuclease Inhibitor 141 253 IPR032675 -
Pumo1g02114 280 Gene3D Ribonuclease Inhibitor 4 121 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02114 Pumo-Chr1 47801107 47802395 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02114 18 243 WRKY Transcription Factor Family AT5G45050 27.984 2.81e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02114 - - ccaj:109810206 207.994