Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02100 ATGCGTATTCTGTACCGCGAAGTTTGTTTCGTCCGAGTGAATCTTGATTTCGAGCTTAATTTTCGTTCACTCTGCATCGTCCTCCAACAGGAAGAGCACTACGTTTCTCTCTGGGCTACTTGTGAAGTCTCATCATTTTTCATTTTTGTGAATTTGTTAATGGATGTCAAACAAGGTCAGAACAAGGAAGGGAAGACAGTGCTCCACTTGGTATTAAGGGATCTTGCGCAGATACTAACCCTGTGGCATAGAGCTCCTGAAGTCCTCTTGGGTGCTACACATTACTCAATCGCGGTGGACATATGGTCCATTGGCTGCATATTTGCCGAACTTGTCACCAAACAAGCACTCTTTCCTGGTGATTCCAAGCTGCAACAACTCCTGCATATATTCAGGCTATTGGGTACTCCTAGTGAAGAGGTATTGGGTACTCCTAATAAAGATTTGTTCAGTAAATGA 459 0.4357 MRILYREVCFVRVNLDFELNFRSLCIVLQQEEHYVSLWATCEVSSFFIFVNLLMDVKQGQNKEGKTVLHLVLRDLAQILTLWHRAPEVLLGATHYSIAVDIWSIGCIFAELVTKQALFPGDSKLQQLLHIFRLLGTPSEEVLGTPNKDLFSK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02100 152 Gene3D Transferase(Phosphotransferase) domain 1 77 142 - -
Pumo1g02100 152 PANTHER CELL DIVISION PROTEIN KINASE 76 141 - -
Pumo1g02100 152 SUPERFAMILY Protein kinase-like (PK-like) 77 143 IPR011009 -
Pumo1g02100 152 ProSiteProfiles Protein kinase domain profile. 1 152 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02100 152 Pfam Protein kinase domain 78 136 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02100 Pumo-Chr1 46389743 46391758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02100 77 140 Core Cell Cycle Gene Families AT2G38620 78.125 5.74e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Pumo1g02100 Pkinase 4.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02100 K07760 - gmx:547738 125.561