Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02079 ATGGGAGGGACTCATCAAAACCAAAACCAAAGCTACTCTACCAACCCCGCCGATTACAAGCTTCTCGAAGAAGTTGGTTATGGCGCCACCGCCACAGTCTACAGAGCGATCTATCTTCCCTTCAACCAACTCGTCGCTATCAAGTCCTTGGATCTCGATCGCTGTAATATCAATCTGGATGACTTGCGTAGGGAGGCCCAAACGATGAGTCTGATCGAGCACCCGAACGTGGTGAGGGCATACTGCTCCTTCGCGGTGGAGCGGAGTCTGTGGGTGGTGATGTCGTTCATGGACGAGGGCTCCTGTTTGCACCTCATGAAGATAGCTTACACCGACGGCTTCGAAGAGGACGCAATCGGATCCATCCTCAAAGAAACTCTCAAGGCCTTGCACTACCTCCACCACCACGGCCACATTCATCGGGACGTCAAGGCCGGCAACATTTTACTCGACAGCTCCGGCGCCGTCAAGCTCGCCGACTTCGGGGTCGCCGCTTGCTTGTACGACGCCGGCGACAGACAGCGCTCCAGAAATACTTTTGTTGGGACTCCTTGCTGGATGGCTCCTGAGGTGCTGCAACCTGGAAGTGGCTATAATTCCAAGGCTGATATTTGGTCTTTTGGGATTACGGCACTTGAGTTGGCTCATGGTCATGCACCATTTTCAAAATATCCTCCAATGAAGGTTCTTCTAATGACAATACAGAATGCCCCTCCTGGACTTGATTATGATCGAGATAAAAAGTTCTCTAAGTCTTTTAAGGAAATGGTTGCTATGTGTCTGGTGAAAGATCAAACAAAAAGGCCATCAGCAGAGAAGTTACTGAGACATTCCTTCTTCAAACATGCTAAGCCTCCTGAGCTCTCTGTAAAGAAATTGTTTGCTGACTTACCACCTCTTTGGAATCGTGTAAAAGCCCTCCAGCTCAAAGATGCAGCACAACTAGCAGTGAAGAAAATGCCTTCTGCAGAAGAAGAGGCAATATCTCAGAGTCAATACAAACGAGGAGTTAGCGCGTGGAACTTTGATATTGATGATTTGAAAGCTCAAGCTTCATTGGTGAAGGATGATGATATTGCAGAGAGGGAAGAAGATGAAAACATTTTTTTGACTAATTACAAGGCTGGTGCAATTGATTCCCAGTCTGTTACTGGCAAAATGAATTCAGAGAAATCACCACATAATAAGATCACATCACAGGTAAGTGCGATTGACATAAAACAGACTGAGCAGAGTGAATACTCGAACAGAAAGAAGATTCTTGAAAGTGAAATCCAGGAACCTGGATTGACCAAAAATATTATTTGGAAGAGAAATGGGTCAATTACGGAGGCAACATCGTCTAGTGTAGAGAAAGATATAAGTGTGAGCAAAATCAAAGATCAATCTGTGAAAAGCCGTCAAACCCAAAGTGGACCACTGTTGCCAGGCACAGTTCTCAGTCATTCTTTGTCAGAAAGGGGACGAGCATTAGAAAGGCTTGAGAATGGAAATCAGTTACTGGGCGAGAAAAATAACCGTGAAGCGCGACGAGCTCCAAGTTTTAGTAGTCCATTGATGCTTCCAATGCGAGCTTCAGCAAATAGTTTATCGGCTCCAATAAAGTCTTCTGGAGGATTCAGAGATTCCTTGGATGACAAGTCCAAGGCTAATCTAGTGCAAATTAAAGGGCGATTCTCTGTGACGTCAGAAAATTTAGATCTTGTGAAGGATATTCCCGTAAGTTCAGTTTCATGCCGATCTTCACAGGGATCAATATCACCACTGCAGAAATCTGCCAGTGTTAGTGATTGGATGTTGGATTCCAAACAAATGCCAATTGGTCAGGCTCAGGCCACCAAAGATTCTGCCACCAACAATATCTCTGCACCACTTCTTATGACTCACCTTCAAAATCTTTTACAACAAACATCTATTCAACAGGATCTTATAATGAATCTGTTAAATAGCTTGCAATCTGCTGAAGCAATTGAAGTTTCACAGAATGGAAAGTTGCCTCCAATACCTCGCAGTTCAGAAACCAATGGAAGTGTTGATACAGCAGCTTCAGAGAGGGAACGTCTTCTGCTGCTCAAAATTTTAGCGCTTCAGACTCGGATGATCACTTTGACTGATGAGCTGACTGCTGAGAAGTTAAAATACATGCAGTTGCAACAACAGCTAACAGCTCTCTACAGTCAGGAACAAAATAGGGACAAGAGAGAGGAAGTTTCATGA 2217 0.4475 MGGTHQNQNQSYSTNPADYKLLEEVGYGATATVYRAIYLPFNQLVAIKSLDLDRCNINLDDLRREAQTMSLIEHPNVVRAYCSFAVERSLWVVMSFMDEGSCLHLMKIAYTDGFEEDAIGSILKETLKALHYLHHHGHIHRDVKAGNILLDSSGAVKLADFGVAACLYDAGDRQRSRNTFVGTPCWMAPEVLQPGSGYNSKADIWSFGITALELAHGHAPFSKYPPMKVLLMTIQNAPPGLDYDRDKKFSKSFKEMVAMCLVKDQTKRPSAEKLLRHSFFKHAKPPELSVKKLFADLPPLWNRVKALQLKDAAQLAVKKMPSAEEEAISQSQYKRGVSAWNFDIDDLKAQASLVKDDDIAEREEDENIFLTNYKAGAIDSQSVTGKMNSEKSPHNKITSQVSAIDIKQTEQSEYSNRKKILESEIQEPGLTKNIIWKRNGSITEATSSSVEKDISVSKIKDQSVKSRQTQSGPLLPGTVLSHSLSERGRALERLENGNQLLGEKNNREARRAPSFSSPLMLPMRASANSLSAPIKSSGGFRDSLDDKSKANLVQIKGRFSVTSENLDLVKDIPVSSVSCRSSQGSISPLQKSASVSDWMLDSKQMPIGQAQATKDSATNNISAPLLMTHLQNLLQQTSIQQDLIMNLLNSLQSAEAIEVSQNGKLPPIPRSSETNGSVDTAASERERLLLLKILALQTRMITLTDELTAEKLKYMQLQQQLTALYSQEQNRDKREEVS 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02079 738 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 10 711 IPR047173 GO:0043539
Pumo1g02079 738 SMART serkin_6 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02079 738 MobiDBLite consensus disorder prediction 446 480 - -
Pumo1g02079 738 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Pumo1g02079 738 Gene3D Phosphorylase Kinase; domain 1 4 96 - -
Pumo1g02079 738 FunFam Serine/threonine-protein kinase BLUS1 8 96 - -
Pumo1g02079 738 ProSiteProfiles Protein kinase domain profile. 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02079 738 SUPERFAMILY Protein kinase-like (PK-like) 18 330 IPR011009 -
Pumo1g02079 738 Pfam Protein kinase domain 19 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02079 738 Gene3D Transferase(Phosphotransferase) domain 1 100 330 - -
Pumo1g02079 738 FunFam serine/threonine-protein kinase BLUS1-like isoform X2 100 330 - -
Pumo1g02079 738 MobiDBLite consensus disorder prediction 461 478 - -
Pumo1g02079 738 CDD STKc_OSR1_SPAK 18 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02079 Pumo-Chr1 45342201 45351758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02079 8 729 MAP Kinase Kinase Kinase Kinase AT4G24100 63.209 0.0 901
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pumo1g02079 Pkinase 8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02079 - - gmx:100809903 1195.26