Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02059 ATGGTTTCTGATAGATCAAGATCTGTGAGATTTCAAGATGAGCTTGAGACAAATAAGTTAATAGACAACAAAGAAAGTCACTTGTCATTGGTGTCCTTTGATGAAGTGAGTGATCAACTGAAGGGAAGGAAGGATGCAATTGGCAAGTCCTCTGATGGAAGAGAACGTTCCAGGGTCTTCTCTGAGGATTATGATGCAGCACAGATTTTGATATTGGATCCTAGGGGACCTAGATTTCGGTTTCAAACTGCTTATATTGCCCCTTCCTCTCGTGTTTCTGGTAGAGGAGAGCTTATCATAGACTCTTCAAAACTTGCATCAAAGTACATGCGAAGAGACTTCAGGCTTGATCTAGTGGCTGCTCAACCACTTCCACAGGTATTGATTAGGGCCGTAATTCCAAATCTAAAAGGGTCTCAAATGATTGCTTCAAGGCATGTTTTACGCCTAGTTTCCATTTTCCAGTACCTCTTGAGGTTGTATCTTATTATTCCTCTATCATCTGACATTGTCAAGGCAAATGGGGTAATGATGGAAAAAGCATGGGCTGGGGCAGCATATAATCTGATGCTCTATATGCTGGCTAGTCATGTTTTAGGATCATCTTGGTATATGTTATCAATTGAACGCCAGAATGAATGA 642 0.4097 MVSDRSRSVRFQDELETNKLIDNKESHLSLVSFDEVSDQLKGRKDAIGKSSDGRERSRVFSEDYDAAQILILDPRGPRFRFQTAYIAPSSRVSGRGELIIDSSKLASKYMRRDFRLDLVAAQPLPQVLIRAVIPNLKGSQMIASRHVLRLVSIFQYLLRLYLIIPLSSDIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSSWYMLSIERQNE 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02059 213 SUPERFAMILY Voltage-gated potassium channels 104 208 - -
Pumo1g02059 213 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 79 212 - -
Pumo1g02059 213 Pfam Ion transport protein 106 211 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02059 Pumo-Chr1 45162712 45164755 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02059 58 212 Ion Channels AT2G28260 59.355 2.99e-58 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02059 K05391 - gmx:100815543 247.284