Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02058 ATGAATAGTAATGTTGCTGATGATAAAGAAGTACAGTTCTTGGATGACAACCCAGAAAGCAAGATGAAGAAAGGAAAGAAATATGATTCTTCATTAAATGGAAAGCAAGAATTGGTTTTTTCAAAACCAAGCAAAAAAATGAGGAAGGATAATGGGTTAGAAAACAATGAAGGTGAAGAAGACAATCGAGGCAAGCAGATGATGACGAAGAAGAAGTTGGGTGAAGAAAGCCAACATGAGGATTACAATGAATTTAAAAGCCATGAAAATAAAGATGACAGCCAATACAAGAAGGAGGAGGAGAAGAAGAAAAAACTGAGTGAAGAAAGCAATAGTAAAGAGTATAATGAGTTTGAAAGCAATAAAGTTGGAGATGATGACCAAGGTAAGAAGATGAAGAAGAAGAAACTGTGTGACAAAAGCAAAAGTAAGGAGAATTGTGAGTTCAATAGCAAGCATATGAAGAAGAAATCGGATGAAGAAAGCCAACATGAGGATTACAATGAATTTAAAAGCAATGAAGATAAAGATGACAGTCAATACAAGAAGGAAGAGAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAAGTAAGGAGTATAATGAGTTTGAAAGCAATGAAGGTGAAGATGATGGCCAAGGTAAGAAGAGGAAGAAGAAAAAACTGAGTGAAGAAAGCAAAAGTAAGGAGTATAATGAGTTTGAAAGCAATGAAGGTGAAGATGATGTCCTAGTCGATGATCAAAGCAAGAAGATGAAGACAAAGAAGAAAGCTAAGGCAGATACTGGCGAATCTCGTAATCCTGCACACAGTGGACCATCCAAACCCAAACGAGTAACTTTTTCTGATCAAGTGGATGTTTGTTGTGATGGCTTAGTCCGTGGGAAAAGGTTTACACCAGAAGAAGATGAGAAGATTAAATTGGCCGTTTTTGATTATATAGAGTCTCATGGTTTGGGAGATGAAGGTCTAGATATGTTAGAGATTGTTGGAAGGAAATTTGGAGCAGCCTTACCTGAGAGGCCTTATGTTAGTGTGTATACTCGTGCTCATATTTTGTTTGAAAGGGGTGAGAAGCGTAAGTGGACACCTGAGGAGTTTGAATTTTTACAGAAGGTCAAGGAACAACATGGATCTGATTGGAAATCAATAGCTGAAGCATTGGGCAAACATCGATTTCATGTAAAGGATGCATGGCGTAGAATAAAATTAAGCAATACAAACCATGGACGATGGACCCAAGAGGAGTATCAAAATTTATTTGATTTAGTAAACCTGAATCTACATGTGAGAGCTTCACAGGGTTATGGAAAATCAAAACATGGTATGCTGCGAGATAATATTGGTTGGGAGGCAATTGGTGACAAATTGACAACTAGATCCAGTGCGCTCTGCTGCCAAAAGTGGTATGATAAATTAACATCACTATGGTTGCTAATGGTTGAAATTCTTGCAAAAAGATTTTGCCCCGACTTATTGGAAGTAAAAGAGGCCTTTGATGCAAAACCTGTGTTTTCACTCATTAAGTTCACTTTACCTCAGGAGAGGGGGAAATCATAA 1566 0.3742 MNSNVADDKEVQFLDDNPESKMKKGKKYDSSLNGKQELVFSKPSKKMRKDNGLENNEGEEDNRGKQMMTKKKLGEESQHEDYNEFKSHENKDDSQYKKEEEKKKKLSEESNSKEYNEFESNKVGDDDQGKKMKKKKLCDKSKSKENCEFNSKHMKKKSDEESQHEDYNEFKSNEDKDDSQYKKEEKKRKKKKLSEESKSKEYNEFESNEGEDDGQGKKRKKKKLSEESKSKEYNEFESNEGEDDVLVDDQSKKMKTKKKAKADTGESRNPAHSGPSKPKRVTFSDQVDVCCDGLVRGKRFTPEEDEKIKLAVFDYIESHGLGDEGLDMLEIVGRKFGAALPERPYVSVYTRAHILFERGEKRKWTPEEFEFLQKVKEQHGSDWKSIAEALGKHRFHVKDAWRRIKLSNTNHGRWTQEEYQNLFDLVNLNLHVRASQGYGKSKHGMLRDNIGWEAIGDKLTTRSSALCCQKWYDKLTSLWLLMVEILAKRFCPDLLEVKEAFDAKPVFSLIKFTLPQERGKS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02058 521 SUPERFAMILY Homeodomain-like 361 422 IPR009057 -
Pumo1g02058 521 Gene3D - 404 477 - -
Pumo1g02058 521 MobiDBLite consensus disorder prediction 245 266 - -
Pumo1g02058 521 SMART sant 360 407 IPR001005 -
Pumo1g02058 521 SMART sant 410 477 IPR001005 -
Pumo1g02058 521 SMART sant 296 358 IPR001005 -
Pumo1g02058 521 Gene3D - 365 403 - -
Pumo1g02058 521 CDD SANT 363 392 IPR001005 -
Pumo1g02058 521 ProSiteProfiles Myb-like domain profile. 356 405 IPR001005 -
Pumo1g02058 521 MobiDBLite consensus disorder prediction 41 236 - -
Pumo1g02058 521 Coils Coil 176 203 - -
Pumo1g02058 521 MobiDBLite consensus disorder prediction 9 31 - -
Pumo1g02058 521 PANTHER GB|AAC33480.1 17 477 - -
Pumo1g02058 521 Pfam Myb-like DNA-binding domain 364 422 - -
Pumo1g02058 521 Coils Coil 89 116 - -
Pumo1g02058 521 MobiDBLite consensus disorder prediction 1 281 - -
Pumo1g02058 521 ProSiteProfiles Myb-like domain profile. 406 475 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02058 Pumo-Chr1 45153743 45155963 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo1g02058 Myb_DNA-bind_6 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02058 - - gsj:114382741 509.605