Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02054 ATGCTAAGCCATTTGCATCATTGTAATCTTGTGAAACTCATTGGTGATGACAAGAAAAGGAGCCCTCTAAATTGGGAAGCACCGACAAAAATTGCCCTTGGAGCTGCAAGAGGATTGGCTTATCGTGTAATTCACCGAGATTTTAAAGCTAGCAATGTGTTGTTAGAAGATGACTTTACCCCCAAGGTTTCTGATTTTGGATTAGCAAGAGAAGCGATTGAAGGAAATAGTCATATTTCTACAAGGGTCATGGGTACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGCCATTTACTCGTTAAGAGTGATGTTTATAGTTATGGTGTTGTGCTGCTTGAGCTTCTAACAGGCAGAAAACCAGTGGACATGTCTCAACCTCATGGACAGGAGAATCTTGTAACGTGGGCTCGACCACTGTTGAGAAGTAGAGAAGTTTAG 444 0.4189 MLSHLHHCNLVKLIGDDKKRSPLNWEAPTKIALGAARGLAYRVIHRDFKASNVLLEDDFTPKVSDFGLAREAIEGNSHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPHGQENLVTWARPLLRSREV 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02054 147 ProSiteProfiles Protein kinase domain profile. 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo1g02054 147 PANTHER OS01G0750732 PROTEIN 1 146 - -
Pumo1g02054 147 SUPERFAMILY Protein kinase-like (PK-like) 1 141 IPR011009 -
Pumo1g02054 147 Gene3D Transferase(Phosphotransferase) domain 1 4 147 - -
Pumo1g02054 147 ProSitePatterns Serine/Threonine protein kinases active-site signature. 43 55 IPR008271 GO:0004672|GO:0006468
Pumo1g02054 147 Pfam Protein kinase domain 26 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02054 Pumo-Chr1 45032655 45033781 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02054 1 146 Receptor kinase-like Gene Family AT5G56890 67.956 1.46e-71 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pumo1g02054 Pkinase 2.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02054 - - gmx:100790546 255.373