Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02046 ATGGGAGAAATGAAGCTACTAGGAGTTTGGCCTAGTCCATACGTTTACAGGATCATATGGGCTTTAGAGCTGAAGGGAGTAAAGTTCCAGTCCTTGTTCTTGATGAAAAAGCCAATCACCGAATCCATGGTTATTCTTGAATACATAGATGAAACATGGCCACAGCCACCCTTGCTTCCTCAGGACCCATATGAAAGGGCCATGACACGGTTTTGGGTTAGTTTTGCTGAGGAAAAGAGTATTTCGTTTATGTCATTCTTTGTGACTGTTGGAGAAGAGTTTCAGAAGGCAACAAAGGAAGTTAGAGAAGTACTCAAAGTGTTGGAAGAAACCATTGGAGATAAAAAGTATTTTGGTGGTGAAGAAATTGGACTGTTAGACATAAATTTAGGGTGGATAGCCTTGTCATTTGGAGTCAATGAAGATATTGTTGGTGTTAAAGTGTTGGTTGTGGATGATTTCCCTAGCTTGTTTACTTGGATTCAAAACTTCAGGGAGCACCCCGCTATCAAAACCAACCTTCCAAATCACCAAGAGTTGTTTGCTTATTACAAGCAAAAGAGAGAGACTATTATTCCATCCTAA 585 0.4017 MGEMKLLGVWPSPYVYRIIWALELKGVKFQSLFLMKKPITESMVILEYIDETWPQPPLLPQDPYERAMTRFWVSFAEEKSISFMSFFVTVGEEFQKATKEVREVLKVLEETIGDKKYFGGEEIGLLDINLGWIALSFGVNEDIVGVKVLVVDDFPSLFTWIQNFREHPAIKTNLPNHQELFAYYKQKRETIIPS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02046 194 SUPERFAMILY Thioredoxin-like 4 66 IPR036249 -
Pumo1g02046 194 Gene3D Glutaredoxin 34 61 - -
Pumo1g02046 194 CDD GST_C_Tau 64 186 IPR045074 GO:0004364|GO:0006749
Pumo1g02046 194 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 62 184 IPR010987 -
Pumo1g02046 194 FunFam Tau class glutathione S-transferase 59 194 - -
Pumo1g02046 194 SUPERFAMILY GST C-terminal domain-like 51 190 IPR036282 -
Pumo1g02046 194 Pfam Glutathione S-transferase, C-terminal domain 92 168 IPR004046 -
Pumo1g02046 194 Gene3D - 62 194 - -
Pumo1g02046 194 Gene3D Glutaredoxin 1 33 - -
Pumo1g02046 194 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 36 179 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02046 Pumo-Chr1 44898380 44899135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02046 3 191 Glutathione S-transferase Gene Family AT2G29420 37.850 1.75e-42 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02046 K00799 - gmx:100500361 328.946