Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02040 ATGCGAAGAGACTTCAGGCTTGATCTAGTGGCTGCTCAACCACTTCCACAGGTATTGATTAGGGCCGTAATTCCAAATCTAAAAGGGTCTCAAATGATTGCTTCAAGGCATGTTTTACGCCTAGTTTCCATTTTCCAGTACCTCTTGAGGTTGTATCTTATTATTCCTCTATCATCTGACATTGTCAAGGCAAATGGGGTAATGATGGAAAAAGCATGGGCTGGGGCAGCATATAATCTGATGCTCTATATGCTGGCTAGTCATGTTTTAGGATCATCTTGGTATATGTTATCAATTGAACGCCAGAATGAATGA 315 0.4095 MRRDFRLDLVAAQPLPQVLIRAVIPNLKGSQMIASRHVLRLVSIFQYLLRLYLIIPLSSDIVKANGVMMEKAWAGAAYNLMLYMLASHVLGSSWYMLSIERQNE 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02040 104 SUPERFAMILY Voltage-gated potassium channels 3 99 - -
Pumo1g02040 104 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 2 103 - -
Pumo1g02040 104 Pfam Ion transport protein 5 102 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02040 Pumo-Chr1 44878574 44879899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02040 1 102 Ion Channels AT2G28260 62.745 7.11e-40 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02040 K05391 - gmx:100815543 189.889