Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02036 ATGTCTCCGTTGATTGTTGCCTTGGCTACAATTGCAGCAGCGATCCTCCTATATTGTCTAATAACACGCTCTTCGTTACCACTCCCACTCCCACCGGGCCCAAAACCATGGCCCATAGTGGGAAACTTGCCGCACATGGGCCCAGTGCCGCACCACTCCCTGGCGGCCTTGGCCCGTATCCACGGCCCGTTGATGCACCTCCGCCTGGGCTTCGTGGACGTGGTGGTGGCGGCGTCGGCCTCCGTGGCAGAACAATTCTTGAAGATTCACGACGCTAATTTCAGTAGCAGGCCACCCAATGCCGGTGCCAAATACATTGCTTATAACTACCAGGACCTCGTCTTTGCCCCCTATGGCCCGCGCTGGCGCTTGCTCCGGAAACTCACCTCCGTTCACCTCTTCTCCGCCAAGGCCATGGATGAATTTAGACACTTGCGTCAGGAAGAGGTAACAAGATTGACACGTAACTTAGCAAGTTCAGAGTCAAAAGCAGTGAACTTGGGACAATTACTGAATGTATGCACCACGAACGCATTAGCCAGGGTAGTGATTGGACGGCGAGTGTTCAATGATGGGAATGGTGGGTGTGATCCTAGAGCTGATGAGTTTAAGGCTATGGTGGTGGAGTTGATGGTCTTGGCTGGAGTTTTCAACATTGGTGACTTTATTCCTTCCTTGGAGTGGCTTGACCTTCAAGGGGTGCAAGCTAAGATGAAGAAATTGCACAAAAGATTTGATGCATTTTTGGCCACCATTATTGAGGAGCACAATACTTCTTCTAAGAATTTGTTGAGTATCTTATTGTCGCTTCAAGATGTGAGGGATGATGATGGAAACCATCTCACTCATACCGAGATCAAAGCACTACTTCTGAACATGTTTACGGCTGGGACTGACACATCATCAAGCACCACAGAATGGGCCATCGCGGAATTGATCCGAAACCCAAGAATTCTGGCCCAAGTCCAACAAGAGTTGGACACTGTTGTGGGCCAAGACAGGAATGTGAAAGAAGAGGATTTAGCCCACCTACCATACTTACAAGCTGTGATCAAGGAAACCTTTAGGCTCCACCCATCAACCCCTCTTTCTTTGCCACGTGTTGCTGCCGAGAGCTGCGAGATATTTGGCTACCACATCCCCAAGGGCGCCACGCTCTTGGTGAATGTTTGGGCCATAGCTCGAGACCCAAAAGAGTGGGTCAACCCATTGGAGTTCAAGCCCGAAAGGTTCCTCCCGAATGGTGAGAAGGCCGATGTTGATGTTAGGGGCAATGACTTTGAGGTGATACCCTTTGGTGCTGGACGAAGGATTTGTGCTGGGCTCAGTCTTGGGCTTCGAATGGTTCAATTTCTAACTGCAACCTTGGCCCATTCGTTTGATTGGGAACTAGAAGATGGCCTAAACCCAGAAAAGTTGAACATGGACGAAGCATATGGACTAACCCTACAACGAGCTGTGCCTCTTTCAGTGCACCCTAAGCCCAGGCTCGCACCACATGTTTACTCAATGTCTTCCTAA 1521 0.5016 MSPLIVALATIAAAILLYCLITRSSLPLPLPPGPKPWPIVGNLPHMGPVPHHSLAALARIHGPLMHLRLGFVDVVVAASASVAEQFLKIHDANFSSRPPNAGAKYIAYNYQDLVFAPYGPRWRLLRKLTSVHLFSAKAMDEFRHLRQEEVTRLTRNLASSESKAVNLGQLLNVCTTNALARVVIGRRVFNDGNGGCDPRADEFKAMVVELMVLAGVFNIGDFIPSLEWLDLQGVQAKMKKLHKRFDAFLATIIEEHNTSSKNLLSILLSLQDVRDDDGNHLTHTEIKALLLNMFTAGTDTSSSTTEWAIAELIRNPRILAQVQQELDTVVGQDRNVKEEDLAHLPYLQAVIKETFRLHPSTPLSLPRVAAESCEIFGYHIPKGATLLVNVWAIARDPKEWVNPLEFKPERFLPNGEKADVDVRGNDFEVIPFGAGRRICAGLSLGLRMVQFLTATLAHSFDWELEDGLNPEKLNMDEAYGLTLQRAVPLSVHPKPRLAPHVYSMSS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02036 506 SUPERFAMILY Cytochrome P450 31 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 Pfam Cytochrome P450 31 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 Gene3D Cytochrome P450 26 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PANTHER CYTOCHROME P450 98A9 5 503 - -
Pumo1g02036 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Pumo1g02036 506 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02036 506 FunFam Red aleurone1 22 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02036 Pumo-Chr1 44809231 44812266 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02036 4 506 Cytochrome P450 AT5G07990 68.039 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02036 K05280 - gmx:547475 881.322