Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo1g02035 | ATGACGGAAGTGGCGAGATCAGTGGTGCACGACGTTTTGGGACAAAGAGTCGTCGACGTGGACCAGCCAATCGTCGATTACATCGTGAACGTCCTCGCCGACGATGACTTCGATTTCGGCCTCGACGGCGAAGGCGCCTTCGAAGCCCTCGGCGAGCTCCTCGTCGCCGCCGGCTGCGTCGACGATTTCTCGGAGTGCCGCTCCGTGTGCAGCACGCTTTGCGACAAGTTCGGGAAGCACGGTTTGGTGAAGGAGAAGCCGACTGTGCGAAGCCTGGCGGCGCCGTTTCGAATGAACGAGGGATTGGACGACGTCGTCCAAGCTCCCAAGAAGAAGCCCGAGCCCGTCGACGGCCCTCTCCTATCTGAACGCGACCGTTTAAAGCTCGAGAGGCGAAAGCGCAAGGAGGAACGCCAGCGAGAGGCACAATACCAAATGCACTTGGCGGAGATGGAGGCGGCACGAGCTGGGATGCCGGTGGCGTGTGTGAGGCATGATAGCAGCGGGGGACCAAACGTGAAGGACATTCATATGGAGAATTTCAACATCTCTGTTGGTGGGCGTGATCTCATTGTGGATGGTTGTGTCACGCTTTCATTTGGAAGGCATTATGGTTTGGTAGGAAGAAATGGGACGGGGAAAACCACTTTCCTTAGACACATGGCTATGCATGCCATTGATGGTGTTCCGAGGAATTGTCAGATACTGCATGTGGAGCAAGAGGTGACAGGTGATGATACGACTGCCTTGCAGTGTGTCCTCAACTCTGACATTGAGAGGACTCAGCTTCACGACGAAGAAGCTCAGTTAGTTGCCAAACAGAGAGAATTTGAGGACAAAATCGAAAAGGGTGATTCGAATGGAGTGGTTGATAGGGATGGCATTTCAAAAAGGCTTGAGGAAATATATAAGAGGCTTGAACTCATTGATGCTGATTCTGCAGAGGCACGAGCAGCATCGATACTAGCGGGTTTGAGTTTCTCTACTGAGATGCAGAAGAGGGCAACAAAAACATTTTCTGGAGGATGGCGGATGCGAATAGCTCTTGCTCGTGCATTGTTTATAGAGCCTGATATATTGCTTCTTGATGAGCCTACGAATCATCTTGATCTTCATGCTGTCTTATGGCTTGAATCGTACTTGGTTAAATGGCCAAAAACATTTATTGTTGTTTCTCATGCTAGAGAATTTTTAAACACGGTGGTTACTGATATAATTCACTTACAAAACCAAAAGCTGACTACTTATAAAGGGAATTATGATACTTTTGAGAAGACTCGAGAAGAACAAATTAAAAACCAGCAAAAAGCAGTAGAGGCAAACGAACGTTCAAGATCTCATATGCAGACCTTCATTGACAAGTTTCGTTATAATGCGAAGAGGGCATCACTTGTTCAATCTAGAATCAAGGCTTTGGAGCGAATGGGCCATGTGGATGAAATTGTTAATGATCCTGACTACAAATTTGAGTTCCCCACTCCAGATGATAGACCTGGTCCACCGATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGGCCCATTCTGTTTAAGAATTTGAACTTTGGGATTGATCTCGACAGTCGTATTGCAATGGTTGGACCAAATGGTATTGGCAAATCAACTATACTTAAGTTAATTGCTGGGGATCTTCAGCCCAGTTCTGGGACTGTCTTCCGTTCTGCTAAGGTTCGTATAGCAGTGTTCAGTCAGCACCATGTTGATGGACTGGACTTATCCTCAAATCCTCTCCTGTATATGATGCGCTGCTATCCTGGAGTTCCAGATCAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTAACCGGAAATCTCGCGTTGCAGCCAATGTATACATTGTCAGGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTTAAGAAGCCACACATAATATTGCTTGATGAGCCATCCAATCATCTGGATTTGGATGCTGTTGAGGCGCTTATTCAAGGTCTTGTGCTGTTCCAAGGAGGCATTCTCATGGTGAGTCACGATGAGCACCTCATCTCTGGAAGCGTGGAGGAACTATGGGTTGTATCCCAAGGAAGAGTGGCACCATTCCATGGCACATTCCAAGATTATAAGAAGATACTCCAATCATCCTAG | 2142 | 0.4739 | MTEVARSVVHDVLGQRVVDVDQPIVDYIVNVLADDDFDFGLDGEGAFEALGELLVAAGCVDDFSECRSVCSTLCDKFGKHGLVKEKPTVRSLAAPFRMNEGLDDVVQAPKKKPEPVDGPLLSERDRLKLERRKRKEERQREAQYQMHLAEMEAARAGMPVACVRHDSSGGPNVKDIHMENFNISVGGRDLIVDGCVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGVPRNCQILHVEQEVTGDDTTALQCVLNSDIERTQLHDEEAQLVAKQREFEDKIEKGDSNGVVDRDGISKRLEEIYKRLELIDADSAEARAASILAGLSFSTEMQKRATKTFSGGWRMRIALARALFIEPDILLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQNQKLTTYKGNYDTFEKTREEQIKNQQKAVEANERSRSHMQTFIDKFRYNAKRASLVQSRIKALERMGHVDEIVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGDLQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPDQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVLFQGGILMVSHDEHLISGSVEELWVVSQGRVAPFHGTFQDYKKILQSS | 713 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo1g02035 | 713 | ProSitePatterns | ABC transporters family signature. | 339 | 353 | IPR017871 | GO:0005524|GO:0016887 | |
Pumo1g02035 | 713 | PANTHER | ATP-BINDING TRANSPORT PROTEIN-RELATED | 152 | 712 | - | - | |
Pumo1g02035 | 713 | FunFam | ATP-binding cassette sub-family F member 3 | 465 | 713 | - | - | |
Pumo1g02035 | 713 | Gene3D | - | 465 | 713 | IPR027417 | - | |
Pumo1g02035 | 713 | Gene3D | - | 126 | 448 | IPR027417 | - | |
Pumo1g02035 | 713 | Pfam | ABC transporter | 197 | 367 | IPR003439 | GO:0005524 | |
Pumo1g02035 | 713 | Coils | Coil | 263 | 283 | - | - | |
Pumo1g02035 | 713 | ProSitePatterns | ABC transporters family signature. | 622 | 636 | IPR017871 | GO:0005524|GO:0016887 | |
Pumo1g02035 | 713 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 176 | 435 | IPR003439 | GO:0005524 | |
Pumo1g02035 | 713 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 503 | 712 | IPR003439 | GO:0005524 | |
Pumo1g02035 | 713 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 484 | 705 | IPR027417 | - | |
Pumo1g02035 | 713 | Pfam | ABC transporter | 406 | 486 | IPR032781 | - | |
Pumo1g02035 | 713 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 176 | 440 | IPR027417 | - | |
Pumo1g02035 | 713 | SMART | AAA_5 | 528 | 695 | IPR003593 | GO:0016887 | |
Pumo1g02035 | 713 | SMART | AAA_5 | 200 | 412 | IPR003593 | GO:0016887 | |
Pumo1g02035 | 713 | CDD | ABCF_EF-3 | 503 | 695 | - | - | |
Pumo1g02035 | 713 | Pfam | ABC transporter | 520 | 650 | IPR003439 | GO:0005524 | |
Pumo1g02035 | 713 | FunFam | ABC transporter F family member 3 | 128 | 448 | - | - | |
Pumo1g02035 | 713 | CDD | ABCF_EF-3 | 176 | 412 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo1g02035 | Pumo-Chr1 | 44794845 | 44807764 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo1g02035 | 459 | 664 | Calmodulin-binding Proteins | AT2G36910 | 25.620 | 3.75e-10 | 61.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo1g02035 | K06158 | - | gmx:547980 | 1334.32 |