Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02035 ATGACGGAAGTGGCGAGATCAGTGGTGCACGACGTTTTGGGACAAAGAGTCGTCGACGTGGACCAGCCAATCGTCGATTACATCGTGAACGTCCTCGCCGACGATGACTTCGATTTCGGCCTCGACGGCGAAGGCGCCTTCGAAGCCCTCGGCGAGCTCCTCGTCGCCGCCGGCTGCGTCGACGATTTCTCGGAGTGCCGCTCCGTGTGCAGCACGCTTTGCGACAAGTTCGGGAAGCACGGTTTGGTGAAGGAGAAGCCGACTGTGCGAAGCCTGGCGGCGCCGTTTCGAATGAACGAGGGATTGGACGACGTCGTCCAAGCTCCCAAGAAGAAGCCCGAGCCCGTCGACGGCCCTCTCCTATCTGAACGCGACCGTTTAAAGCTCGAGAGGCGAAAGCGCAAGGAGGAACGCCAGCGAGAGGCACAATACCAAATGCACTTGGCGGAGATGGAGGCGGCACGAGCTGGGATGCCGGTGGCGTGTGTGAGGCATGATAGCAGCGGGGGACCAAACGTGAAGGACATTCATATGGAGAATTTCAACATCTCTGTTGGTGGGCGTGATCTCATTGTGGATGGTTGTGTCACGCTTTCATTTGGAAGGCATTATGGTTTGGTAGGAAGAAATGGGACGGGGAAAACCACTTTCCTTAGACACATGGCTATGCATGCCATTGATGGTGTTCCGAGGAATTGTCAGATACTGCATGTGGAGCAAGAGGTGACAGGTGATGATACGACTGCCTTGCAGTGTGTCCTCAACTCTGACATTGAGAGGACTCAGCTTCACGACGAAGAAGCTCAGTTAGTTGCCAAACAGAGAGAATTTGAGGACAAAATCGAAAAGGGTGATTCGAATGGAGTGGTTGATAGGGATGGCATTTCAAAAAGGCTTGAGGAAATATATAAGAGGCTTGAACTCATTGATGCTGATTCTGCAGAGGCACGAGCAGCATCGATACTAGCGGGTTTGAGTTTCTCTACTGAGATGCAGAAGAGGGCAACAAAAACATTTTCTGGAGGATGGCGGATGCGAATAGCTCTTGCTCGTGCATTGTTTATAGAGCCTGATATATTGCTTCTTGATGAGCCTACGAATCATCTTGATCTTCATGCTGTCTTATGGCTTGAATCGTACTTGGTTAAATGGCCAAAAACATTTATTGTTGTTTCTCATGCTAGAGAATTTTTAAACACGGTGGTTACTGATATAATTCACTTACAAAACCAAAAGCTGACTACTTATAAAGGGAATTATGATACTTTTGAGAAGACTCGAGAAGAACAAATTAAAAACCAGCAAAAAGCAGTAGAGGCAAACGAACGTTCAAGATCTCATATGCAGACCTTCATTGACAAGTTTCGTTATAATGCGAAGAGGGCATCACTTGTTCAATCTAGAATCAAGGCTTTGGAGCGAATGGGCCATGTGGATGAAATTGTTAATGATCCTGACTACAAATTTGAGTTCCCCACTCCAGATGATAGACCTGGTCCACCGATAATAAGTTTCAGTGATGCATCATTTGGTTATCCTGGGGGGCCCATTCTGTTTAAGAATTTGAACTTTGGGATTGATCTCGACAGTCGTATTGCAATGGTTGGACCAAATGGTATTGGCAAATCAACTATACTTAAGTTAATTGCTGGGGATCTTCAGCCCAGTTCTGGGACTGTCTTCCGTTCTGCTAAGGTTCGTATAGCAGTGTTCAGTCAGCACCATGTTGATGGACTGGACTTATCCTCAAATCCTCTCCTGTATATGATGCGCTGCTATCCTGGAGTTCCAGATCAGAAGCTTCGAGCTCACTTAGGTTCTTTTGGTGTAACCGGAAATCTCGCGTTGCAGCCAATGTATACATTGTCAGGTGGTCAGAAAAGCAGGGTTGCCTTTGCAAAGATAACTTTTAAGAAGCCACACATAATATTGCTTGATGAGCCATCCAATCATCTGGATTTGGATGCTGTTGAGGCGCTTATTCAAGGTCTTGTGCTGTTCCAAGGAGGCATTCTCATGGTGAGTCACGATGAGCACCTCATCTCTGGAAGCGTGGAGGAACTATGGGTTGTATCCCAAGGAAGAGTGGCACCATTCCATGGCACATTCCAAGATTATAAGAAGATACTCCAATCATCCTAG 2142 0.4739 MTEVARSVVHDVLGQRVVDVDQPIVDYIVNVLADDDFDFGLDGEGAFEALGELLVAAGCVDDFSECRSVCSTLCDKFGKHGLVKEKPTVRSLAAPFRMNEGLDDVVQAPKKKPEPVDGPLLSERDRLKLERRKRKEERQREAQYQMHLAEMEAARAGMPVACVRHDSSGGPNVKDIHMENFNISVGGRDLIVDGCVTLSFGRHYGLVGRNGTGKTTFLRHMAMHAIDGVPRNCQILHVEQEVTGDDTTALQCVLNSDIERTQLHDEEAQLVAKQREFEDKIEKGDSNGVVDRDGISKRLEEIYKRLELIDADSAEARAASILAGLSFSTEMQKRATKTFSGGWRMRIALARALFIEPDILLLDEPTNHLDLHAVLWLESYLVKWPKTFIVVSHAREFLNTVVTDIIHLQNQKLTTYKGNYDTFEKTREEQIKNQQKAVEANERSRSHMQTFIDKFRYNAKRASLVQSRIKALERMGHVDEIVNDPDYKFEFPTPDDRPGPPIISFSDASFGYPGGPILFKNLNFGIDLDSRIAMVGPNGIGKSTILKLIAGDLQPSSGTVFRSAKVRIAVFSQHHVDGLDLSSNPLLYMMRCYPGVPDQKLRAHLGSFGVTGNLALQPMYTLSGGQKSRVAFAKITFKKPHIILLDEPSNHLDLDAVEALIQGLVLFQGGILMVSHDEHLISGSVEELWVVSQGRVAPFHGTFQDYKKILQSS 713
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02035 713 ProSitePatterns ABC transporters family signature. 339 353 IPR017871 GO:0005524|GO:0016887
Pumo1g02035 713 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 152 712 - -
Pumo1g02035 713 FunFam ATP-binding cassette sub-family F member 3 465 713 - -
Pumo1g02035 713 Gene3D - 465 713 IPR027417 -
Pumo1g02035 713 Gene3D - 126 448 IPR027417 -
Pumo1g02035 713 Pfam ABC transporter 197 367 IPR003439 GO:0005524
Pumo1g02035 713 Coils Coil 263 283 - -
Pumo1g02035 713 ProSitePatterns ABC transporters family signature. 622 636 IPR017871 GO:0005524|GO:0016887
Pumo1g02035 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 176 435 IPR003439 GO:0005524
Pumo1g02035 713 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 712 IPR003439 GO:0005524
Pumo1g02035 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 484 705 IPR027417 -
Pumo1g02035 713 Pfam ABC transporter 406 486 IPR032781 -
Pumo1g02035 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 440 IPR027417 -
Pumo1g02035 713 SMART AAA_5 528 695 IPR003593 GO:0016887
Pumo1g02035 713 SMART AAA_5 200 412 IPR003593 GO:0016887
Pumo1g02035 713 CDD ABCF_EF-3 503 695 - -
Pumo1g02035 713 Pfam ABC transporter 520 650 IPR003439 GO:0005524
Pumo1g02035 713 FunFam ABC transporter F family member 3 128 448 - -
Pumo1g02035 713 CDD ABCF_EF-3 176 412 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pumo1g02035 Pumo-Chr1 44794845 44807764 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02035 459 664 Calmodulin-binding Proteins AT2G36910 25.620 3.75e-10 61.6
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02035 K06158 - gmx:547980 1334.32