Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g02020 ATGGATCACTCCTCTATTCTTTTGTTGTCCCACCTTCACCTTCAACCCTTGTGGTCTTCTTTGATTATTATTGTGATTTTTTGCATAACCTTTCTCAAAGGCTTTGGATCTCACTTGTTTAACAAAACCAAGAAACAAAAACTACCCTTGCCCCCCGGTCCCAAACCATGGCCTATCATTGGTAACCTTCCTGAAATGCTTGCAAATAGACCTACATTCCGGTGGATACAAAAATTAATGAAGGAAATGAACACCGAAATTGCATGTATCCGCCTAGGAAATGTCCATGTTATCCCCGTGAATTGCCCCACCATTGCTCGTGAATTCTTGAGAAAACAAGATGCTATTTTTGCCTCTAGACCCACAAGCATATCCACTTATCTTACCAGCAGTGGATATCTCACCACAGCCGTTGTACCCCTTGGGGAACAATGGAAGAAAATGAGGAGAATTGTTGGTAACGATTTGTTGTCCACCACCACCCACCAACGACTTGAATATAAGAGGGTTGAAGAAGCCGACAACCTTGTGTTCCACATCTACAACAAGTGCAAAAACAATGTCAATGATAATTACGTTGGCCTTGTGAATGTGAGGGATGTTGCACAACACTATAGTTGCAATGTGATCAAGAAATTGAGCTTTAGTACGAGGTACTTTGGGGAGGGTAAGAAGGATGGAGGGCCTGGTTGCGAGGAAGTGGAACATCTTGATGCCATTTTCACTATGCTTAAATACATTTATGACTTTCGTGTTTCCGACTATGTCCCTTGCTTGAGGGGACTTGACTTGGATGGTCATGAGAGCAAGGTGAAGGAGGCTATTAAAATAGTGAACAAGTATCATGATCCCATCGTTGAGCAGCGTATCAAAGAATGGAATGATGGGTCCAAAATTGATAGAGAGGATTTCCTTGATATCCTCATCTCACTCAAAGATGCCAACAATAACCCGGTATTGACTACACAGGAAATCAAGGCACAAATCATAGAATTGATGATGGCAGCAGTGGATAACCCATCAAACGCAGTTGAATGGGGTCTTGCGGAGATGATAAACCAACCTGAGTTGCTTCAACGCGCCATAGAAGAATTGGACAAGGTAGTGGGGAAAGAGAGACTGGTCCAAGAATCAGACATCCCAAAGCTCAACTACATAAAAGCATGCGCAAGAGAAGCTCTTCGCCTTCACCCCGTTGTGCCATTCAATGTTCCCCATGTTTCTTTGAAAGACACAATAGTGAACAACTACCTAATCCCAAAGGGTAGCCACGTTCTGTTAAGTAGACAAGAACTTGGGCGAAACCCGAAAGTTTGGAGTGACGAACCTCACAGGTTCAAGCCAGAACGTCATCTTAAGAGTGAGGTGGTCTTGACGGAGCCAGATTTGAAGTTCATTTCGTTCAGCACGGGACGGCGTGGTTGTCCAGGAGTGATGCTTGGCACCACAATGACTGTGATGCTGTTTGCTAGGTTGCTTCAAGCCTTCACTTGGACTGCACCACCCAATGTGTCAAGCATCAATCTTGCTGAGAACAATCATGATATTTTTCTCGCTCATCCACTTGTGGCGCTAGCAAAGCCAAGATTAGCACCAGAGCTTTATGCAATGTGA 1614 0.4405 MDHSSILLLSHLHLQPLWSSLIIIVIFCITFLKGFGSHLFNKTKKQKLPLPPGPKPWPIIGNLPEMLANRPTFRWIQKLMKEMNTEIACIRLGNVHVIPVNCPTIAREFLRKQDAIFASRPTSISTYLTSSGYLTTAVVPLGEQWKKMRRIVGNDLLSTTTHQRLEYKRVEEADNLVFHIYNKCKNNVNDNYVGLVNVRDVAQHYSCNVIKKLSFSTRYFGEGKKDGGPGCEEVEHLDAIFTMLKYIYDFRVSDYVPCLRGLDLDGHESKVKEAIKIVNKYHDPIVEQRIKEWNDGSKIDREDFLDILISLKDANNNPVLTTQEIKAQIIELMMAAVDNPSNAVEWGLAEMINQPELLQRAIEELDKVVGKERLVQESDIPKLNYIKACAREALRLHPVVPFNVPHVSLKDTIVNNYLIPKGSHVLLSRQELGRNPKVWSDEPHRFKPERHLKSEVVLTEPDLKFISFSTGRRGCPGVMLGTTMTVMLFARLLQAFTWTAPPNVSSINLAENNHDIFLAHPLVALAKPRLAPELYAM 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g02020 537 Gene3D Cytochrome P450 37 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 SUPERFAMILY Cytochrome P450 51 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 PRINTS E-class P450 group I signature 475 498 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 PRINTS E-class P450 group I signature 105 126 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 PRINTS E-class P450 group I signature 465 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 FunFam Cytochrome P450 9 43 533 - -
Pumo1g02020 537 Pfam Cytochrome P450 51 516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo1g02020 537 CDD CYP79 85 530 - -
Pumo1g02020 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 468 477 IPR017972 GO:0005506|GO:0016705
Pumo1g02020 537 PANTHER CYTOCHROME P450 98A9 25 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g02020 Pumo-Chr1 44308392 44310795 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g02020 12 535 Cytochrome P450 AT5G05260 53.409 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g02020 - K14984 gmx:100786887 919.457