Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01979 ATGTTGGTTGCAATATGTTGCCTCACACTTTCCTCCAAGATGAGGGCAGACAATTTCATGTTTGATCAGTGTCTGATGATGGACCAATGCGAGGATCTCGGTAGAGATGCGATGATGAGAATGGAGCTTCACATTGTCAAAGGACTTCGCTGGCAAATGATGCCTGTGACTCCTTTTGACTTCTTGGACTATTATTATCATGGCTGGTTCAAGACAAACGGTGTTGCTTACCAACGCAACTGCATCAATGAGATAATACTCGAGTCTCAAGGAGAGGACTATTCTTTCACTGAATACAAGCCTTCTCAGATTGCAAAGTCTGCTTTTCTGGCTGTTACCTACCTTACAAATCGTGGAATATTTGAAACAGCTGACAAAACGGAGAAGGAGATCCGCTGTGCCAGGGATCTTGTAAATCTCTGTCGTAAGAGGGGCATCAATGTGAAAAGTGACAGAGGAAATGAAGTTTCAGCTGCAGGGGAGGCTAAGATAACAGAAGAACCAGAGAAGCTGATGAATTTTGAGCTGCAGTGA 534 0.4382 MLVAICCLTLSSKMRADNFMFDQCLMMDQCEDLGRDAMMRMELHIVKGLRWQMMPVTPFDFLDYYYHGWFKTNGVAYQRNCINEIILESQGEDYSFTEYKPSQIAKSAFLAVTYLTNRGIFETADKTEKEIRCARDLVNLCRKRGINVKSDRGNEVSAAGEAKITEEPEKLMNFELQ 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01979 177 PANTHER CYCLINS 2 139 IPR039361 -
Pumo1g01979 177 SUPERFAMILY Cyclin-like 57 143 IPR036915 -
Pumo1g01979 177 SUPERFAMILY Cyclin-like 2 53 IPR036915 -
Pumo1g01979 177 Gene3D - 55 142 - -
Pumo1g01979 177 Pfam Cyclin, C-terminal domain 56 119 IPR004367 -
Pumo1g01979 177 Gene3D - 2 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01979 Pumo-Chr1 42667404 42670298 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01979 2 114 Core Cell Cycle Gene Families AT4G03270 31.933 3.91e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01979 - - aprc:113855478 125.176