Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g01961 ATGATTAGGCTAGAAGAGAAGATCACTAATTTAGAATCGGAGAATCAGGTTCTACGTCAACAAGTTGTGTCCATGGCACCTAATAAGTTCCTTTCAGGACTTTCAAGATCAATTATCCAGACCCAGGATAACAATGATGTCTTGGCTTATTGGTTATCCAATGCCTCTACATTTCTCTTGTTACTCCTGCACACGCTCAAGGCTAGTGCTGCTGCTGGAATGGCTCCGCAATGCCATCGTTCTTCATCAGCAACCCTATTTGGGAGGATGACTTAA 276 0.4312 MIRLEEKITNLESENQVLRQQVVSMAPNKFLSGLSRSIIQTQDNNDVLAYWLSNASTFLLLLLHTLKASAAAGMAPQCHRSSSATLFGRMT 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g01961 91 Coils Coil 1 21 - -
Pumo1g01961 91 ProSiteProfiles Dilute domain profile. 28 91 IPR002710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g01961 Pumo-Chr1 42092124 42092912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g01961 39 91 Myosins gene family AT1G54560 83.019 7.93e-21 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo1g01961 K10357 - rcu:8268196 85.8853